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Job DescriptionP10371
Confidence98.50%DateThu Jan 5 11:32:09 GMT 2012
Rank134Aligned Residues186
% Identity14%Templatec3nm3D_
PDB info PDB header:transferaseChain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  GNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVK
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Template Sequence  GKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDR. . . . . . IDVAMAIGADGIHVGQDDMP
Template Known Secondary structure  T

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   24.....30.........40.........50.........60.........70....... ..80.........90.......
 
   108.110.........120.........130.........140.........150.........160.........170.........180... ..
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Query Sequence  SQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSN. . VS
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Template Sequence  . . . . IPMIRKLVGPDM. VIGWSVG. . . . . . . . . . . . . . . . . . FPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNKKMGTA
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   98.100......... 110...... ...120.........130.........140.........150....
 
   186...190.... .....200.........210..... ....220.........230.........240....
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Query Sequence  LYEEVCARY. . . . . PQVAFQSSGGIGDIDDVAALR. . . . . . . . GTGVRGVIVGRALLEGKFTVKEAIACWQN
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Template Sequence  GAIRVLDALERNNAHWCRTVGIGGL. HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASL. DAAKSTKILRG
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   158.160.........170.........180.. .......190.........200.........210...... ...220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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