Job Description P10371 Confidence 86.59% Date Thu Jan 5 11:32:09 GMT 2012 Rank 363 Aligned Residues 68 % Identity 21% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A	L	L	E	G	K	F	T	V	K	E	A	I	A	C	W	Q	N	A
Query Conservation
Alig confidence															.	.	.											.																															.	.	.	.	.	.
Template Conservation															.	.	.											.																															.	.	.	.	.	.
Template Sequence		L	V	L	L	D	L	M	L	P	G	M	N	G	.	.	.	I	D	V	C	R	V	L	R	A	D	.	S	G	V	P	I	V	M	L	T	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M	.	.	.	.	.	.	K	P	F	K	P	K	E	L	V	A	R	V	R	A	R
Template Known Secondary structure							S	S		S	S	S			.	.	.											.											T	T		S	S								T	T							.	.	.	.	.	.		S
Template Predicted Secondary structure															.	.	.											.																															.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions