 |
Job Description | P10371 | Confidence | 86.80% | Date | Thu Jan 5 11:32:09 GMT 2012 |
Rank | 361 | Aligned Residues | 73 |
% Identity | 12% | Template | c3luaA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:response regulator receiver protein; |
PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum
|
Resolution | 2.40 Å |
|
 |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | E | Q | L | V | E | T | Y | L | P | V | G | L | K | H | V | L | C | T | D | I | S | R | D | G | T | L | A | G | S | N | V | S | L | Y | E | E | V | C | A | R | Y | P | Q | V | A | F | Q | S | S | G | G | I | G | D | I | D | D | V | A | A | L | R | G | T | G | V | R | G | V | I | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
N | L | K | K | F | Y | S | I | F | K | D | L | D | S | I | T | L | I | I | X | D | I | A | F | P | V | E | K | E | G | L | E | V | L | S | A | I | R | N | N | S | R | T | A | N | T | P | V | I | I | A | T | K | S | D | N | P | G | Y | R | H | A | A | L | K | F | K | V | S | D | Y | I | L |
Template Known Secondary structure |   |
S |  |  |  |  |  | T | T | T | T | T |
|
|
|
| S |  |  |  |  |
| S |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | G | G | G | T | T |
|
|  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|