Job Description P10371 Confidence 91.80% Date Thu Jan 5 11:32:09 GMT 2012 Rank 301 Aligned Residues 171 % Identity 18% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																										.	.																	.	.	.																.	.	.	.
Query SS confidence																										.	.																	.	.	.																.	.	.	.
Query Sequence		P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	.	.	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	.	.	.	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	.	.	.	.	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S
Query Conservation																										.	.																	.	.	.																.	.	.	.
Alig confidence																										.	.																	.	.	.																.	.	.	.
Template Conservation
Template Sequence		R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A	G	S	N	A	T	H	E	A	V	G	L	A	K	F	A	K	E	H	G	A	D	G	I	L	S	V	A
Template Known Secondary structure									T	T	T						T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S										S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		104	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		T	A	V	K	.	.	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G
Query Conservation						.	.
Alig confidence						.	.												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	.	.	.	.	.	.	.	.	.	.	.	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D	T	I	I	K	L	F	R	D	C	E	N	I	.	.	.	.	.	.	.	.	.	Y	G	V	E	A	S
Template Known Secondary structure				S	S														.	.	.	.	.	.	.	.	.	.	.						S	S												S																T	T		.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.												.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		G	N	I	D	K	C	V	D	L	L	A	H	E	P	R	X	X	L	I	S	G	E	D	.	.	.	.	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S
Template Known Secondary structure		S													T	T	S	B						G	.	.	.	.	G	G							T	T							S	G	G
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions