Job Description P10371 Confidence 96.59% Date Thu Jan 5 11:32:09 GMT 2012 Rank 216 Aligned Residues 172 % Identity 14% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																			.	.	.	.																																																									.	.	.
Template Conservation																			.	.	.	.
Template Sequence		I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	.	.	.	.	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K
Template Known Secondary structure												T		S					.	.	.	.			G	G	G													T	S			S	S								S											T	T		S								G	G	G
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
										109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	.	.	T	V	G	C	A	T
Template Known Secondary structure																							T	T								T	T	G	G	G	S				.	.	.	.	.	.	.	.	.	.	.	.															S							.	.	S	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.													.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	.	.	.	.	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.			.
Template Conservation																															.
Template Sequence		P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	.	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure																	S	S							B		T	T	S		.												T
Template Predicted Secondary structure																															.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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