Job Description P10371 Confidence 97.93% Date Thu Jan 5 11:32:09 GMT 2012 Rank 165 Aligned Residues 127 % Identity 13% Template c3gndC_ PDB info PDB header:lyase Chain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	.	.	.	.	.	.	.	.	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	V	R	D	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	S	L	A	T	R	I
Template Known Secondary structure								T	T		S								T	T	S	T	T																			T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																		.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	.	.	.	.	.	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A	L	L	E	G	K	F	T
Query Conservation																																																			.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.										.															.	.	.	.	.																									.
Template Conservation																	.	.	.	.	.	.	.	.	.	.										.																																												.
Template Sequence		A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	.	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	.	H
Template Known Secondary structure						T		S								T	.	.	.	.	.	.	.	.	.	.	T	T							T	.		S	S								S																	T	T							S					T	S	S	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.										.																																												.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.
		235	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	A	I	A	C	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	M	M	K	A	V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions