Job Description P10371 Confidence 80.26% Date Thu Jan 5 11:32:09 GMT 2012 Rank 418 Aligned Residues 172 % Identity 20% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																										.	.																		.	.															.	.	.	.
Query SS confidence																										.	.																		.	.															.	.	.	.
Query Sequence		P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	.	.	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	N	.	.	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	.	.	.	.	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T
Query Conservation																										.	.																		.	.															.	.	.	.
Alig confidence																										.	.																		.	.															.	.	.	.
Template Conservation
Template Sequence		D	L	I	D	W	H	I	E	N	G	T	D	G	I	V	A	V	G	T	T	G	E	S	A	T	L	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	A	K	R	V	P	V	I	A	G	T	G	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P
Template Known Secondary structure										T	T							S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S															T		S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		105	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	V	K	.	.	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S
Query Conservation					.	.
Alig confidence					.	.												.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	.	.	.	.	.	.	.	.	.	.	.	I	A	E	A	T	S	I	P	M	I	I	Y	N	V	P	G	R	T	V	V	S	M	T	N	D	T	I	L	R	L	A	E	I	P	N	I	V	G	V	K	E	A	S	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure			S	S														.	.	.	.	.	.	.	.	.	.	.				T			S												S	S											T	T	S	T	T								S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.										.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A
Query Conservation
Alig confidence																							.	.	.
Template Conservation																							.	.	.
Template Sequence		N	I	G	S	N	I	E	L	I	N	R	A	P	E	G	F	V	V	L	S	G	.	.	.	D	D	H	T	A	L	P	F	M	L	C	G	G	H	G	V	I	T	V	A	A
Template Known Secondary structure													S		T	T							.	.	.		G	G	G							T	T							S	G	G
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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