Job Description P10371 Confidence 96.68% Date Thu Jan 5 11:32:09 GMT 2012 Rank 213 Aligned Residues 174 % Identity 16% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																.	.													.	.	.	.	.	.	.	.												.									.	.									.	.	.	.
Query SS confidence																.	.													.	.	.	.	.	.	.	.												.									.	.									.	.	.	.
Query Sequence		L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	.	.	V	D	L	T	G	A	K	D	P	A	K	R	.	.	.	.	.	.	.	.	Q	I	P	L	I	K	T	L	V	A	G	.	V	N	V	P	V	Q	V	G	.	.	G	G	V	R	S	E	E	D	.	.	.	.	V	A	A	L	L	E	A	G	V	A
Query Conservation																.	.													.	.	.	.	.	.	.	.												.									.	.									.	.	.	.
Alig confidence																.	.													.	.	.	.	.	.	.	.												.									.	.									.	.	.	.
Template Conservation
Template Sequence		A	R	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A
Template Known Secondary structure							T	T	T		S														T	S	S		S	S	S																		S	T	T	S							T	T		S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		98	.	100	.	.												.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	V	V	G	.	.	.	.	.	.	.	.	.	.	.	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G	A	D
Template Known Secondary structure								B						B																					T							.	.	.	.	.	.	.	.	.	.	.	.	.																									T		S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.														.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	.	.	.	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A	L	L
Query Conservation																																						.	.	.
Alig confidence										.	.	.	.	.	.	.	.																					.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		V	G	F	L	E	G	I	T	.	.	.	.	.	.	.	.	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L
Template Known Secondary structure						T	T			.	.	.	.	.	.	.	.												T	T	T	S		B						T	T	S	S	S												T		S					T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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