Job Description P10371 Confidence 92.49% Date Thu Jan 5 11:32:09 GMT 2012 Rank 293 Aligned Residues 139 % Identity 15% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																		.	.	.	.										.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																		.	.	.	.										.	.	.	.
Query Sequence		L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	.	.	.	.	.	.	.	.	.	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	.	.	.	.	G	G	G	V	R	S	E	E	D	.	.	.	.	V	A	A	L	L	E	A	G	V	A
Query Conservation																													.	.	.	.	.	.	.	.	.																		.	.	.	.										.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																		.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q
Template Known Secondary structure								T	T		S						T	T					T	T			S	S	S	T	T																T			S	S								T	T	S		S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	V	G	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G
Query Conservation
Alig confidence							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		M	V	K	L	E	.	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	P	V	C	A	H	V	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	V	P	.	.	.
Template Known Secondary structure							.			G	G	G										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																									T		S						S			.	.	.
Template Predicted Secondary structure							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		108	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	T	L	V	A	A	E	V	T	R	E	.	L	S	I	P	T	I	G	I	G	A
Template Known Secondary structure		.	.	.	.	.	.											.		S	S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.											.
Template SS confidence
								183	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions