Job Description P10371 Confidence 97.15% Date Thu Jan 5 11:32:09 GMT 2012 Rank 200 Aligned Residues 174 % Identity 14% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.														.	.	.	.	.	.	.	.																		.	.										.	.	.	.
Query SS confidence																.	.														.	.	.	.	.	.	.	.																		.	.										.	.	.	.
Query Sequence		L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	.	.	V	D	L	T	G	A	K	D	P	A	K	R	Q	.	.	.	.	.	.	.	.	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	.	.	G	G	G	V	R	S	E	E	D	.	.	.	.	V	A	A	L	L	E	A	G	V	A	R
Query Conservation																.	.														.	.	.	.	.	.	.	.																		.	.										.	.	.	.
Alig confidence																.	.														.	.	.	.	.	.	.	.																		.	.										.	.	.	.
Template Conservation
Template Sequence		A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A
Template Known Secondary structure								T	T		S																S		S	S	S																				S							T	T		S	S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		99	100	.																	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	.	.	.	.	.	.	.	.	.	.	.	.	A	A	I	E	R	A	I	A	Y	V	E
Template Known Secondary structure							B						T	T							B																		S		T	T	S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.	.	180	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	.	.	.	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A	L	L
Query Conservation																																										.	.	.
Alig confidence													.	.	.	.	.	.	.	.															.							.	.	.
Template Conservation													.	.	.	.	.	.	.	.															.
Template Sequence		A	G	A	D	M	I	F	P	E	A	M	.	.	.	.	.	.	.	.	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	.	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y
Template Known Secondary structure			T		S								.	.	.	.	.	.	.	.		S													.	S		B						T	T	S	S	S											T	T								S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.															.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions