Job Description P10371 Confidence 99.50% Date Thu Jan 5 11:32:09 GMT 2012 Rank 43 Aligned Residues 195 % Identity 15% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																															.																										.
Query SS confidence																															.																										.
Query Sequence		P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	.	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	.	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	S	Q	D
Query Conservation																															.																										.
Alig confidence																															.									.	.																.
Template Conservation																																								.	.
Template Sequence		E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	T	H	C	F	K	D	V	H	L	X	V	R	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F	A
Template Known Secondary structure										T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	T	T	S									S												T	T		S						T	T		T	T	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V
Query Conservation
Alig confidence																							.	.	.	.	.	.														.	.	.	.	.	.								.
Template Conservation																							.	.	.	.	.	.														.	.	.	.	.	.								.
Template Sequence		L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	.	.	.	.	.	.	I	G	A	C	L	C	P	E	T	P	I	S	E	.	.	.	.	.	.	L	E	P	Y	L	D	Q	.	I	D	V	I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V
Template Known Secondary structure								T	T						T	T							.	.	.	.	.	.							T	T	S		G	G	G	.	.	.	.	.	.	G	T	T	T	T	T	T	.		S						S			T	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.														.	.	.	.	.	.								.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		191								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																													.	.
Query SS confidence			.	.	.	.	.	.	.																													.	.
Query Sequence		C	.	.	.	.	.	.	.	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	.	.	R	G	V	I	V	G	R	A	L	L	E	G	K	F	T	V	K	E	A	I	A	C	W	Q	N	A
Query Conservation			.	.	.	.	.	.	.																													.	.
Alig confidence			.	.	.	.	.	.	.															.														.	.													.	.
Template Conservation																								.																												.	.
Template Sequence		I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	.	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	G	.	.	E	L	K	T	N	L	K	V	W	K	S	S
Template Known Secondary structure									G	G	G	G	G	G							S	S		.											S	S	S									G	G	G	G	S	S	.	.
Template Predicted Secondary structure																								.																												.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions