Job Description P10371 Confidence 97.96% Date Thu Jan 5 11:32:09 GMT 2012 Rank 164 Aligned Residues 179 % Identity 15% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	V	A	A	L	L	E	A	.	.	G	V	A	R	V	V	V	G	S	T	A	V	K	S	Q
Query Conservation																																																																	.	.
Alig confidence																																																		.	.														.	.
Template Conservation																																																		.	.
Template Sequence		I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	L	S	L	D	.	.	I	Q	N	V	D	L	T	E	R	A	L	R	A	Y	P	G	R	S	L	F	N	S	A	K	V	D	E	E	E	L
Template Known Secondary structure											T	T		S							S	S	G	G	G	S																T		S						.	.															S	S									S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	.	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E
Query Conservation																																																										.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	.	.	.	.	.	.	.	.	.	.	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	S	D	R	V	I	F	D	P	G	V	L	P	L	G	A	E	G	K	P	V	E	V	L	K
Template Known Secondary structure																			S		S	S	S				S							.	.	.	.	.	.	.	.	.	.												T	T		T	T	S										G	G	G	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.											.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		189	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210												.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure							.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	C	A	R	.	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	.	.	.	.	.	.	.	.	.	.	.	V	A	A	L	R	G	T	G	V	R	G	V	I	V
Query Conservation							.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.									.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		T	I	E	F	I	S	S	K	G	F	N	T	T	V	.	.	G	L	S	N	L	S	F	L	P	D	R	S	Y	Y	N	T	A	F	L	V	L	G	I	S	K	G	L	S	S	A	I	M
Template Known Secondary structure									T	T			B			.	.	B	G	G	G	T	T				S															T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions