Job Description P10371 Confidence 80.35% Date Thu Jan 5 11:32:09 GMT 2012 Rank 417 Aligned Residues 172 % Identity 21% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																										.	.																	.	.																.	.	.	.
Query SS confidence																										.	.																	.	.																.	.	.	.
Query Sequence		P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	.	.	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	.	.	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	.	.	.	.	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T
Query Conservation																										.	.																	.	.																.	.	.	.
Alig confidence																										.	.																	.	.																.	.	.	.
Template Conservation
Template Sequence		E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	A	S	I	A	M	S	K	W	A	E	S	I	G	V	D	G	L	L	V	I	T	P
Template Known Secondary structure										T	T							S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		105	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	V	K	.	.	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S
Query Conservation					.	.
Alig confidence					.	.												.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	.	.	.	.	.	.	.	.	.	.	.	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	K	N	I	V	A	V	K	E	A	S	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure			S	S														.	.	.	.	.	.	.	.	.	.	.				T			S												S												T	T	S	S	S								S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A
Query Conservation
Alig confidence																							.	.	.
Template Conservation																							.	.	.
Template Sequence		N	I	S	Q	I	A	Q	I	K	A	L	C	G	D	K	L	D	I	Y	S	G	.	.	.	N	D	D	Q	I	I	P	I	L	A	L	G	G	I	G	V	I	S	V	L	A
Template Known Secondary structure														G	G	G						S	.	.	.		G	G	G							T	T							S	G	G
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions