Job Description P10371 Confidence 82.51% Date Thu Jan 5 11:32:09 GMT 2012 Rank 394 Aligned Residues 189 % Identity 14% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	R	L	H	Q	G	D	Y	G	K	Q	R	D	Y	G	.	N	D	P	L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	V	A	A	L	L
Query Conservation																	.
Alig confidence																	.																					.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		S	T	L	R	E	G	E	Q	F	E	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	.	.	.	.	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	L	D	A	A	K	V	A	V
Template Known Secondary structure					T	G	G	G	G	S	T	T																			T		S					.	.	.	.			G	G	G														S			S	S								S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		E	A	G	V	A	R	V	V	V	G	S	T	A	.	.	.	.	.	.	.	.	.	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	.	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	L	L	A	V	Y	E	A	V	A	P
Template Known Secondary structure			T	T		S								S																									T	T	.	S							S	S	T	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.											G	G
Template Predicted Secondary structure																																									.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																	.									.	.	.	.
Query SS confidence																																	.									.	.	.	.
Query Sequence		G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	.	P	Q	V	A	F	Q	S	S	.	.	.	.	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V
Query Conservation																																	.									.	.	.	.
Alig confidence																					.												.									.	.	.	.				.
Template Conservation																					.																												.
Template Sequence		Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	.	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	.	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V
Template Known Secondary structure		G		S							T	T	S								.												T	T	T	S							B		T	T	S		.											T	T
Template Predicted Secondary structure																					.																												.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions