Return to main results Retrieve Phyre Job Id

Job DescriptionP10371
Confidence97.24%DateThu Jan 5 11:32:09 GMT 2012
Rank197Aligned Residues161
% Identity12%Templatec2yytA_
PDB info PDB header:lyaseChain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.... .....90.........100........ .110.........120... ......130..
Predicted Secondary structure 








.....






.




....
Query SS confidence 





















. . . . .























.














. . . .








Query Sequence  PLIKTLVAGVNVPVQVGGGVRS. . . . . EEDVAALLEAGVARVVVGSTAVKS. QDMVKGWFERFGADA. . . . LVLALDVRI
Query Conservation    
  
     


   


  ..... 
        

  
 
       .           
   ....

   
   
Alig confidence 








.











.....























.














....








Template Conservation    
  
   .   
  
 
  


 
           


 



   
   
                    
 
  

Template Sequence  AIVAFLKEQ. GHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLT
Template Known Secondary structure  .T

S
T
SGGG
TS
TTS


SS
T
Template Predicted Secondary structure 
.





















Template SS confidence 















































































   46...50.... .....60.........70.........80.........90.........100.........110.........120....
 
   133......140.........150.........160.........170.........180.........190.........200.........210..
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  DEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVA
Query Conservation         
          
            
   

   
   
   
 
      
      



  


    

 
Alig confidence 







































............



















......

Template Conservation 
                   
   
      
  
 
   ............     

      


   
......  
Template Sequence  STDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA. . . . . . . . . . . . NEAAFIKERCGASFLAVTVT. . . . . . PR
Template Known Secondary structure  T

TT


S
T



G............GG
TTS


......
Template Predicted Secondary structure 
















............







......
Template SS confidence 















































































   125....130.........140.........150.........160.... .....170.........180.... ..
 
   213......220.........230.........240...
Predicted Secondary structure 








Query SS confidence 






























Query Sequence  ALRGTGVRGVIVGRALLEGKFTVKEAIACWQ
Query Conservation   
   
 
 






  
     

     
Alig confidence 



















.









Template Conservation   
   


 






  
 .

  

  
 
Template Sequence  KARALGSDYIVIGRSLTRAA. DPLRTYARLQ
Template Known Secondary structure  TT
SB
T
S.S
Template Predicted Secondary structure 








.
Template SS confidence 






























   203......210.........220.. .......230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions