Job Description P10371 Confidence 71.91% Date Thu Jan 5 11:32:09 GMT 2012 Rank 467 Aligned Residues 104 % Identity 16% Template c2yxxA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure analysis of diaminopimelate decarboxylate (lysa) Resolution 1.70 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	.	.	.	.	.	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V
Query Conservation																																				.	.	.	.	.
Alig confidence																																				.	.	.	.	.																							.									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.									.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	L	R	K	V	A	E	I	H	G	T	P	T	Y	V	Y	F	E	E	T	L	R	K	R	S	R	L	V	K	E	V	F	E	G	V	N	L	L	P	T	F	A	V	K	A	N	N	N	P	V	L	L	K	I	L	R	E	E	G	F	.	G	X	D	V	V	T	K	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S																				T	T	T	S								G	G	G													T	T		.						S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	A	A	K	L	A	G	V	P	S	H	T	V	V	W	N	G	N	G	K	S	R	D	Q	X	E	H	F	L	R	E	D	V	R	I	V	N	V
Template Known Secondary structure									T	T			G	G	G						S													T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions