 |
Job Description | P10371 | Confidence | 96.04% | Date | Thu Jan 5 11:32:09 GMT 2012 |
Rank | 230 | Aligned Residues | 93 |
% Identity | 18% | Template | c2vefB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:dihydropteroate synthase; |
PDBTitle: dihydropteroate synthase from streptococcus pneumoniae
|
Resolution | 1.8 Å |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | D | P | L | P | R | L | Q | D | Y | A | A | Q | G | A | E | V | L | H | L | V | D | L | T | . |
. |
. |
. |
. |
G | A | K | D | P | A | K | R | Q | I | P | L | I | K | T | L | V | A | G | V | N | V | P | V | Q | V | G | G | G | V | R | S | E | E | D | V | A | A | L | L | E | A | G | V | A | R | V | V | V | G |
Query Conservation |   |
  |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
| . | . |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
L | E | Q | A | L | Q | Q | A | R | K | L | I | A | E | G | A | S | . |
. |
. |
M | L | D | I | G | G | E | S | Y | V | E | I | E | E | E | I | Q | R | V | V | P | V | I | K | A | I | R | K | E | S | D | V | L | I | S | I | D | . |
. |
T | W | K | S | Q | V | A | E | A | A | L | A | A | G | A | D | L | V | N | D | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | A | V | K | S | Q | D | M | V | K | G | W | F | E | R | F | G | A | D | A | L | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |
|   | . |   |
|   |
|   |   |   |   |   |
|
|
|
|
Template Sequence |   |
T | G | L | M | G | D | E | K | M | P | . |
H | V | V | A | E | A | R | A | Q | V | V | I | M |
Template Known Secondary structure |   |
T | T | T |
| S |
| T | T |  |  | . |  |  |  |  |  |  | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|