Return to main results Retrieve Phyre Job Id

Job DescriptionP10371
Confidence100.00%DateThu Jan 5 11:32:09 GMT 2012
Rank8Aligned Residues220
% Identity19%Templatec2agkA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) PDBTitle: structure of s. cerevisiae his6 protein
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  IIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGG
Query Conservation 


 


  
  
    
          

   
      


 
 
 

     
       
  
     


   

Alig confidence 















............






















......






















Template Conservation 


 


  
  
   ............

 
 
      

  






......  
   
  
        




Template Sequence  FIGCIDLHNGEVKQQH. . . . . . . . . . . . PSSYYAKLYKDRDVQGCHVIKLG. . . . . . PNNDDAAREALQESPQFLQVGGG
Template Known Secondary structure 
TT



............
TT
TT
S......SS
STTTSSS
Template Predicted Secondary structure 


............






......






Template SS confidence 















































































   4.....10......... 20.........30.........40.. .......50.........60.....
 
   82.. .....90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 


...

























Query SS confidence 


. . .









































































Query Sequence  VRS. . . EEDVAALLEAGVARVVVGSTAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVE
Query Conservation 
  ... 
        

  
 
                  
   

   
          
          
       
Alig confidence 


...









































































Template Conservation 

    

 
      

 





 
   
  
       
   





 
        
   

   
         
Template Sequence  INDTNCLEWLKWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTF
Template Known Secondary structure 

TTTTTT
S

GGGB
TT

B

GGGTTTTTTS
Template Predicted Secondary structure 




























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   159160.........170.........180.........190.........200.........210....... ..220........ .230...
Predicted Secondary structure 



























..


..



.
Query SS confidence 


























































. .










. .




.
Query Sequence  TYLPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGT. . GVRGVIVGRAL. . LEGKF.
Query Conservation       
   

   
   
   
 
      
      



  


    

  
   ..
 
 






..  
  .
Alig confidence 




























....

























..










..




.
Template Conservation       
    
 
 
  

   
   
 
....     








 
  

  
  
  
  




 

 

 
 
 
Template Sequence  RELRKYTNEFLIHAGGIDELLVSKLFEWT. . . . KDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLV
Template Known Secondary structure  TTT
S




....TT
SS
S



TTT


TTBGGGT
SSB
Template Predicted Secondary structure 










....

















Template SS confidence 















































































   166...170.........180.........190.... .....200.........210.........220.........230.........240.
 
   234.....240...
Predicted Secondary structure 
Query SS confidence 









Query Sequence  TVKEAIACWQ
Query Conservation     

     
Alig confidence 









Template Conservation            
Template Sequence  KFEDCCRWNE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   249250........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions