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Job DescriptionP10371
Confidence99.01%DateThu Jan 5 11:32:09 GMT 2012
Rank90Aligned Residues143
% Identity25%Templatec2a7nA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l(+)-mandelate dehydrogenase; PDBTitle: crystal structure of the g81a mutant of the active chimera of (s)-2 mandelate dehydrogenase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50....... ..60....
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Query Sequence  PLPRLQDYAAQGAEVLHLVDLTGAKDP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AKRQIPL
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Template Sequence  AQGMVLKALHTGYTTL. VLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEA
Template Known Secondary structure  TT

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S
SS



T



TT


GGGTT


S

SSTTTTSS


TT

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   138.140.........150... ......160.........170.........180.........190.........200.........210......
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  IKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSG
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Template Sequence  LRWLRDLWPHKLLVK. GLLSAEDADRCIAEGADGVILSNHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

S.
STT
S

GG.......................................
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   217..220.........230. ........240.........250......
 
   145....150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  WQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GRQLDCAISPMEVLAQSVAK. TGKPVLIDSGFRRGSDIVKALALGAEAVLL
Template Known Secondary structure  .............................GTS
TT


GGGS.
S

SS

STT
S
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   257..260.........270...... ...280.........290.........300......
 
   225.... 230.........240....
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Query Sequence  GRALL. . . . . EGKFTVKEAIACWQN
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Template Sequence  GRATLYGLAARGETGVDEVLTLLKA
Template Known Secondary structure  S
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   307..310.........320.........330.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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