 |
Job Description | P10371 | Confidence | 94.44% | Date | Thu Jan 5 11:32:09 GMT 2012 |
Rank | 272 | Aligned Residues | 57 |
% Identity | 26% | Template | c1ytkA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase from thermoplasma |
PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase from2 thermoplasma acidophilum with nicotinate mononucleotide
|
Resolution | 2.65 Å |
|
 |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | R | D | G | T | L | A | G | S | N | V | S | L | Y | E | E | V | C | A | R | . |
. |
. |
. |
. |
Y | P | Q | V | A | F | Q | S | S | G | G | I | G | D | I | D | D | V | A | A | L | R | G | T | G | V | R | G | V | I | V | G | R | A | L | L | E |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|
| . |
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|   |
|   |   |
Template Sequence |   |
L | D | T | P | S | S | R | R | G | N | F | E | A | L | I | R | E | V | R | W | E | L | A | L | R | G | R | S | D | I | K | I | M | V | S | G | G | L | . |
D | E | N | T | V | K | K | L | R | E | A | G | A | E | A | F | G | V | G | T | S | I | S | S |
Template Known Secondary structure |   |
 |
|
|
| G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  | S | S |
| . |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | |
. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|