Return to main results Retrieve Phyre Job Id

Job DescriptionP10371
Confidence80.81%DateThu Jan 5 11:32:09 GMT 2012
Rank408Aligned Residues169
% Identity15%Templatec1xuzA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50... ......60.........70.........80.......
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Query Sequence  PRLQDYAAQGAEVLHLVDLTG. . . . . . . . . . . . . . . . . . . . . . . . . AKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEED
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Template Sequence  EMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTPF. . SRAA
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GGGGG


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   3940.........50.........60.........70.........80.........90.........100.........110.. ....
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  VAALLEAGVARVVVGSTAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKH
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Template Sequence  ALRLQRMDIPAYKIGSGECNNYPLIKLVASF. . GKPIILSTGMNSIE. . . . . . . . . . . . . . . . . SIKKSVEIIREAGVPY
Template Known Secondary structure  T
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GGGTT
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   117..120.........130.........140....... ..150.........160. ........170.......
 
   168.170.........180. ........190.........200.........210.........220..
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Query Sequence  VLCTDISRDGTLAG. SNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGV
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Template Sequence  ALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGSIL
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   178.180.........190.........200.........210.........220.........230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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