Job Description P10371 Confidence 98.91% Date Thu Jan 5 11:32:09 GMT 2012 Rank 103 Aligned Residues 173 % Identity 12% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		72	.	.	.	.	.	.	.	80	.									.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		V	N	V	P	V	Q	V	G	G	G	.	.	.	.	.	.	.	.	V	R	S	E	E	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	.	.	.	.	.	.	.	.	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q
Query Conservation												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	H	I	V	G	V	S	I	G	K	N	K	D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K
Template Known Secondary structure		T	T											T	T		S														G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	S	L	Y	E	E	V	C	A	R	Y	P	.	Q	V	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P
Template Known Secondary structure		S										S																	T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A	L	.	L	E	G	K	F	T	V	K	E	A	I	A	C	W	Q	N
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H
Template Known Secondary structure						S	S			S										T	T							S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions