Job Description P31456 Confidence 99.55% Date Thu Jan 5 11:47:48 GMT 2012 Rank 63 Aligned Residues 263 % Identity 16% Template d1d4ca2 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain Resolution 2.90

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	F	D	V	A	I	I	G	L	G	P	A	G	S	A	L	A	R	K	L	A	G	.	K	M	Q	V	I	A	L	D	K	K	H	Q	C	G	T	E	G	F	S	K	P	C	G	G	L	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	T	D	V	V	I	I	G	S	G	G	A	G	L	A	A	A	V	S	A	R	D	A	G	A	K	V	I	L	L	E	K	E	P	I	P	G	G	N	T	K	L	A	A	G	G	M	N	A	A	E	T	K	P	Q	A	K	L	G	I	E	D	K	K	Q	I	M	I	D	D	T	M	K	G	G	R	N	I	N
Template Known Secondary structure					S						S	S												T	T	T								S	S	S	S	S		T	T	G	G	G			S					S	S							T	T																T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
				53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																														.
Query SS confidence		.	.																																																														.
Query Sequence		.	.	D	A	Q	R	S	F	I	R	D	G	L	T	L	P	V	D	V	I	A	N	P	Q	I	F	S	V	K	T	V	D	V	A	A	S	L	T	R	N	Y	Q	R	S	Y	I	N	I	N	R	H	A	F	D	L	W	M	K	S	L	I	P	A	.	S	V	E	V	Y	H	D	S	L	C	R	K	I	W	R	E
Query Conservation		.	.																																																														.
Alig confidence		.	.																																																														.
Template Conservation
Template Sequence		D	P	E	L	V	K	V	L	A	N	N	S	S	D	S	I	D	W	L	T	S	M	G	A	D	M	T	D	V	G	R	M	G	G	A	S	V	N	R	S	H	R	P	T	G	G	A	G	V	G	A	H	V	A	Q	V	L	W	D	N	A	V	K	R	G	T	D	I	R	L	N	S	R	V	V	R	I	L	E	D
Template Known Secondary structure												T											T	T										T	T		S	S						S	T	T	T			S															T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		D	D	K	.	.	.	W	H	V	I	F	R	A	D	G	W	E	Q	H	I	T	A	R	Y	L	V	G	A	D	G	A	N	S	M	V	R	R	H	L	Y	P	D	H	Q	I	R	K	Y	V	A	I	Q	Q	W	F	A	E	K	H	P	V	P	F	Y	S	C	I	F	D	N	S	I	T	N	C	Y	S	W	S	I
Query Conservation					.	.	.
Alig confidence					.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	G	K	V	T	G	V	L	V	K	G	E	Y	T	G	Y	Y	V	I	K	A	D	A	V	V	I	A	A	G	G	F	A	K	N	N	E	R	V	S	K	Y	D	P	K	L	K	G	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S										T	T	T								S										T	T										G	G	G	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		S	K	D	G	Y	F	I	F	G	G	A	Y	P	M	K	D	G	Q	T	R	F	T	T	L	K	E	K	M	S	A	F	Q	F	Q	F	G	K	T	V	K	S	E	K	C	T	V	L	F	P	S	R	W	Q	D	F	V	C	G	K	D	N	A	F	L	I	G	E	A	A	G	F	I	.	.	.	S	A	S	S	L
Query Conservation																																																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																															.	.														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	N	H	P	G	A	T	G	D	G	L	D	V	A	L	Q	A	G	A	A	T	R	D	L	E	M	G	G	L	V	I	D	T	K	A	E	V	K	S	E	K	T	G	K	P	I	.	.	T	G	L	Y	A	A	G	E	V	T	G	G	V	H	G	A	N	R	L	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		S		T	T		S	S									T	T	B														T	T					B	T	T	T	S	S			.	.							G	G	G	B		S	S	S	T	T	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template SS confidence
													335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	S	Y	A	L	D	S	T	D	I	L	R	S	V	L	L	K	Q	P	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	I	S	D	I	V	T	Y	G	R	I	A	G	A	S	A	A	K	F	A	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions