Job Description P31456 Confidence 98.59% Date Thu Jan 5 11:47:48 GMT 2012 Rank 224 Aligned Residues 120 % Identity 24% Template c3g5rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methylenetetrahydrofolate--trna-(uracil-5-)- PDBTitle: crystal structure of thermus thermophilus trmfo in complex with2 tetrahydrofolate Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																										.									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																										.									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		M	E	H	F	D	V	A	I	I	G	L	G	P	A	G	S	A	L	A	R	K	L	A	G	.	K	M	Q	V	I	A	L	D	.	.	.	.	.	.	.	.	.	.	K	K	H	Q	C	G	T	E	G	F	S	K	P	C	G	G	L	L	.	.	.	.	A	P	D	A	Q	R	S	F	I	R	D	G	L	T	L
Query Conservation																										.									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence					.	.																				.									.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation					.	.
Template Sequence		M	E	R	.	.	V	N	V	V	G	A	G	L	A	G	S	E	A	A	W	T	L	L	R	L	G	V	P	V	R	L	F	E	M	R	P	K	R	M	T	P	A	H	G	T	D	R	F	A	E	I	V	C	S	N	S	L	G	G	E	G	E	T	N	A	K	G	L	L	Q	A	E	M	R	R	A	G	S	L	V
Template Known Secondary structure				S	.	.							S													T	T									T	T	T	S			S	S			S	S		T	T				S								S	T	T													T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		P	V	D	V	I	A	N	P	Q	I	F	S	V	K	T	V	D	V	A	A	S	L	T	R	N	Y	Q	R	S	Y	I	N	I	N	R	H	A	F	D	L	W	M	K	S	L	I	P	A	.	.	S	V	E	V	Y	H	D	S	L	C	R	K	I	W	R	E	D	D	K	W	H	V	I	F	R	A	D	G	W	E
Query Conservation																																																		.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	A	A	D	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	A	G	G	A	L	A	V	D	R	E	E	F	S	G	Y	I	T	E	R	L	T	G	H	P	L	L	E	V	V	R	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S																			T		T	T						S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.																	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	I	T	A	R	Y	L	V	G	A	D	G	A	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	I	P	P	G	I	T	V	L	A	T	G	P	L	T
Template Known Secondary structure			S			S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions