Job Description P31456 Confidence 99.97% Date Thu Jan 5 11:47:48 GMT 2012 Rank 23 Aligned Residues 311 % Identity 12% Template c2weuD_ PDB info PDB header:antifungal protein Chain: D: PDB Molecule:tryptophan 5-halogenase; PDBTitle: crystal structure of tryptophan 5-halogenase (pyrh) complex2 with substrate tryptophan Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		M	E	H	F	D	V	A	I	I	G	L	G	P	A	G	S	A	L	A	R	K	L	A	G	.	.	.	.	K	M	Q	V	I	A	L	D	K	K	H	Q	C	G	T	E	G	F	S	K	P	C	G	G	L	L	A	P	D	A	Q	R	S	F	I	R	D	G	L	T	L	P	V	D	V	I	A	N	P	Q	I	F
Query Conservation																										.	.	.	.
Alig confidence					.	.																				.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	S	.	.	V	V	I	V	G	G	G	T	A	G	W	M	T	A	S	Y	L	K	A	A	F	D	D	R	I	D	V	T	L	V	E	S	G	V	.	.	.	.	.	.	.	.	.	.	.	G	E	A	T	F	S	T	V	R	H	F	F	D	Y	L	G	L	D	E	R	E	W	L	P	R	C	A	G	G	Y
Template Known Secondary structure					.	.																						G	G	G	S										.	.	.	.	.	.	.	.	.	.	.						T	T									T							T	T	T	T	T
Template Predicted Secondary structure					.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.												.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		77	.	.	80																																																																				.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	V	A	A	S	L	T	R
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	G	I	R	F	E	N	W	S	E	P	G	E	Y	F	Y	H	P	F	E	R	L	R	V	V	D	G	F	N	M	A	E	W	W	L	A	V	G	D	T	S	F	S	E	A	C	Y	L	T	H	R	L	C	E	A	K	R	A	P	R	M	L	D	G	S	L	F	A	S	L	G	R	S	T	L	A	E	Q	R
Template Known Secondary structure									S	S	S	S	T	T							S							T	T											T																	T	T	B		S	B		T	T	S		B						S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	Y	Q	R	S	Y	I	N	I	N	R	H	A	F	D	L	W	M	K	S	L	I	P	A	S	V	E	V	Y	H	D	S	L	C	R	K	I	W	R	E	D	D	K	W	H	V	I	F	R	A	D	G	W	E	Q	H	I	T	A	R	Y	L	V	G	A	D	G	A	N	S	M	V	R	R	H	L	Y	P	D	.
Query Conservation																																																																																	.
Alig confidence																																																							.																										.
Template Conservation																																																							.
Template Sequence		A	Q	F	P	Y	A	Y	H	F	D	A	D	E	V	A	R	Y	L	S	E	Y	A	I	A	R	G	V	R	H	V	V	D	D	V	Q	H	V	G	Q	D	E	R	G	W	I	S	G	V	H	T	K	Q	H	.	G	E	I	S	G	D	L	F	V	D	C	T	G	F	R	G	L	L	I	N	Q	T	L	G	G	R
Template Known Secondary structure		S																								T	T															T	T	S								S	S	S	.						S							G	G	G								T
Template Predicted Secondary structure																																																							.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
							169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	H	Q	I	R	K	Y	V	A	I	Q	Q	W	F	A	E	K	H	P	V	P	F	Y	S	C	I	F	D	N	S	I	T	N	C	Y	S	W	S	I	S	K	D	G	Y	F	I	F	G	G	A	Y	P	M	K	D	G	Q	T	R	F	T	T	L	K	E	K	M	S	A	F	Q	F	Q	F	G	K
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																										.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		F	Q	S	F	S	D	V	L	P	N	N	R	A	V	A	L	R	V	P	R	E	N	D	E	D	M	R	P	Y	T	T	A	T	A	M	S	A	G	W	M	W	T	I	P	L	F	K	R	D	G	N	G	Y	V	Y	S	D	E	F	I	S	P	.	.	.	.	.	E	E	A	E	R	E	L	R	S	T	V	A	P
Template Known Secondary structure						T	T	T														S	S	G	G	G			S	S							T	T									S	S										T	T	T	S			.	.	.	.	.													T
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	K	S	E	K	C	T	V	L	F	P	S	R	W	Q	D	F	V	C	G	K	D	N	A	F	L	I	G	E	A	A	G	F	I	S	A	S	S	L	E	G	I	S	Y	A	L	D	S	T	D	I	L	R	S	V	L	L	K	Q	P	E	K	L	N	T	A	Y	W	R	A	T	R	K	L	R	L	K	L	F
Query Conservation
Alig confidence																																																													.	.
Template Conservation																																																													.	.
Template Sequence		G	R	D	D	L	E	A	N	H	I	Q	M	R	I	G	R	N	E	R	T	W	I	N	N	C	V	A	V	G	L	S	A	A	F	V	E	P	L	E	S	T	G	I	F	F	I	Q	H	A	I	E	Q	L	V	K	H	F	P	G	.	.	E	R	W	D	P	V	L	I	S	A	Y	N	E	R	M	A	H	M	V
Template Known Secondary structure		T		T	T	S													S		S			T	T					S	T	T	T					G	G	G																	T				.	.	T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		324	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	V	K	S	R	C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	V	K	E	F	L	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions