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Job DescriptionP31456
Confidence99.61%DateThu Jan 5 11:47:48 GMT 2012
Rank53Aligned Residues299
% Identity15%Templatec2uzzD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:n-methyl-l-tryptophan oxidase; PDBTitle: x-ray structure of n-methyl-l-tryptophan oxidase (mtox)
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20... ......30.........40.........50..
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Query Sequence  HFDVAIIGLGPAGSALARKLA. GKMQVIALDKKHQCGTEGFSKPCGGLLAP. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD
Template Known Secondary structure 
S
TTTT


SS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   53......60.........70.........80.........90.........100.........110..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . DAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIP
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Template Sequence  PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   113......120.........130.........140.........150......... 160.........170.........180.........190.
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Query Sequence  ASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANS. MVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYS
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Template Sequence  AGCAQLFNCPVTAIRHDDDGVTIET. . . . ADGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPA
Template Known Secondary structure  TT

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SS
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GGGGGGTSTTS




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   162.......170.........180...... ...190.........200.........210.........220.........230.......
 
   192.......200.........210....... ..220.........230.........240.........250.........260......
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Query Sequence  CIFDNSITNCYSWSISKDGYFIFGGA. . . . . YPMKDGQTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGKD
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Template Sequence  FTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSP. . D
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GGGSTTTTTSSTS
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   238.240.........250.........260.........270.........280.........290.........300.........310.... .
 
   267..270.. .......280.........290.........300.......
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Query Sequence  NAFLIG. . . . . EAAGFISASSLEGISYALDSTDILRSVLLKQPEKL
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Template Sequence  EDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDF
Template Known Secondary structure  SS


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   316...320.........330.........340.........350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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