Job Description P31456 Confidence 99.97% Date Thu Jan 5 11:47:48 GMT 2012 Rank 19 Aligned Residues 327 % Identity 17% Template c2pyxA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:tryptophan halogenase; PDBTitle: crystal structure of tryptophan halogenase (yp_750003.1) from2 shewanella frigidimarina ncimb 400 at 1.50 a resolution Resolution 1.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.														.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		D	V	A	I	I	G	L	G	P	A	G	S	A	L	A	R	K	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	Q	V	I	A	L	D	K	K	H	Q	C	G	T	E	G	F	S	K	P	C	G	G	L	L	A	P	D	A	Q	R	S	F	I	R	D	G	L	T	L	P	.	.	V	D	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																					.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		E	I	I	I	V	G	G	G	T	A	G	W	I	T	A	G	L	L	A	A	E	H	N	V	D	K	G	V	L	A	H	S	P	K	L	N	I	T	L	I	E	S	P	D	V	A	T	I	G	V	.	.	.	.	.	G	E	G	T	W	P	S	X	R	S	T	L	S	K	I	G	I	D	E	N	D	F	I	R	Q
Template Known Secondary structure																											T	T				S	S		S									S	S						S	.	.	.	.	.						T										T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																																																													.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	N	P	Q	I	F	S	V	K	T	V	D	V	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	R
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	D	A	S	F	K	Q	G	S	R	F	I	N	W	C	K	D	P	Q	S	N	V	A	D	S	Y	L	H	P	F	S	L	P	H	G	H	Q	E	L	D	L	C	P	Y	W	L	P	H	A	E	Q	V	S	F	A	E	A	V	C	S	Q	Q	V	L	T	Q	L	G	L	A	P	K	S	I	V	T	A	Q	Y	H
Template Known Secondary structure		T	T											S		S	S			B	T	T	B								S	S			T	T	T	T	T								G	G	G	T	T	T	S								S							T	T	B		S	S		T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		N	Y	Q	R	S	Y	I	N	I	N	R	H	A	F	D	L	W	M	K	S	L	I	P	A	.	S	V	E	V	Y	H	D	S	L	C	R	K	I	W	R	E	D	D	K	W	H	V	I	F	R	A	D	G	W	E	Q	H	I	T	A	R	Y	L	V	G	A	D	G	A	N	S	M	V	R	R	H	L	Y	P	D
Query Conservation																										.
Alig confidence																										.																														.
Template Conservation																																																								.
Template Sequence		F	Q	N	N	Y	G	Y	H	L	N	A	A	K	F	S	Q	L	L	T	E	H	C	T	Q	K	L	G	V	T	H	I	R	D	H	V	S	Q	I	I	N	N	Q	H	G	D	I	E	K	L	I	T	K	Q	N	.	G	E	I	S	G	Q	L	F	I	D	C	T	G	A	K	S	L	L	L	G	E	H	L	Q	V
Template Known Secondary structure			S	S																						T	S																T	T	S								S	S	S	.						S						S	G	G	G								T
Template Predicted Secondary structure																																																								.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		169	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		H	Q	.	.	.	.	.	.	.	I	R	K	Y	V	A	I	Q	Q	W	F	A	E	K	H	P	V	P	F	Y	S	C	I	F	D	N	S	I	T	N	C	Y	S	W	S	I	S	K	D	G	Y	F	I	F	G	G	A	Y	P	M	K	D	G	Q	T	R	F	T	T	L	K	E	K	M	S	A	F	Q	F	Q	F
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																																																							.	.
Template Conservation																																																																	.	.
Template Sequence		P	F	L	S	Q	K	S	V	L	F	N	D	R	A	L	A	I	Q	V	P	Y	S	D	A	N	S	P	I	A	S	C	T	H	S	T	A	Q	P	N	G	W	I	W	D	I	G	L	P	T	R	K	G	V	G	Y	V	Y	S	S	S	H	T	N	.	.	D	I	D	A	Q	K	T	L	F	N	Y	L	G	V	D
Template Known Secondary structure																							S	S	T	T					S	S							T	T									S	S										T	T	T			.	.													T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		G	K	T	V	K	S	E	K	C	T	V	L	F	P	S	R	W	Q	D	F	V	C	G	K	D	N	A	F	L	I	G	E	A	A	G	F	I	S	A	S	S	L	E	G	I	S	Y	A	L	D	S	T	D	I	L	R	S	V	L	L	K	Q	P	.	.	.	.	.	.	.	E	K	L	N	T	A	Y	W	R	A
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	A	A	D	K	L	E	P	R	Q	L	A	I	N	P	G	Y	R	A	K	C	W	Q	N	N	C	I	A	I	G	X	A	A	G	F	I	E	P	L	E	A	S	A	L	A	L	I	E	W	T	A	S	T	L	A	Q	Q	L	P	P	N	R	X	V	X	D	T	I	S	A	R	V	N	E	R	Y	Q	Q	H
Template Known Secondary structure																					S		S			T	T					G	G	G	T						T	T																	T			S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	K	L	R	L	K	L	F	G	K	I	V	K	S	R	C	L	T	A	P	A	L	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	Q	Q	I	I	D	F	L	K	L	H	Y	V	I	S	Q	R	Q	E	D	R	Y	W	R	D
Template Known Secondary structure															T					S	S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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