Job Description P31456 Confidence 99.96% Date Thu Jan 5 11:47:48 GMT 2012 Rank 27 Aligned Residues 290 % Identity 12% Template c2bryA_ PDB info PDB header:transport Chain: A: PDB Molecule:nedd9 interacting protein with calponin homology PDBTitle: crystal structure of the native monooxygenase domain of2 mical at 1.45 a resolution Resolution 1.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		E	H	F	D	V	A	I	I	G	L	G	P	A	G	S	A	L	A	R	K	L	A	G	.	K	M	Q	V	I	A	L	D	K	K	H	Q	C	G	T	E	G	F	S	K	P	C	G	G	L	L	A	P	D	A	Q	R	S	F	I	R	D	G	L	T	L	P	V	D	V	I	A	N	P	Q	I	F	S	V	K	T
Query Conservation																									.
Alig confidence																									.																.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	T	K	C	L	V	V	G	A	G	P	C	G	L	R	A	A	V	E	L	A	L	L	G	A	R	V	V	L	V	E	K	R	I	K	F	S	R	.	.	.	.	.	.	.	H	N	V	L	H	L	W	P	F	T	I	H	D	L	R	A	L	G	A	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T									S													T	T								S		S	S				.	.	.	.	.	.	.																T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																			.																			.	.	.	.	.
Query SS confidence																																			.																			.	.	.	.	.
Query Sequence		V	D	V	A	A	S	L	T	R	N	Y	Q	R	S	Y	I	N	I	N	R	H	A	F	D	L	W	M	K	S	L	I	P	A	.	S	V	E	V	Y	H	D	S	L	C	R	K	I	W	R	E	D	D	.	.	.	.	.	K	W	H	V	I	F	R	A	D	G	W	E	Q	H	I	T	A	R	Y	L	V	G	A
Query Conservation																																			.																			.	.	.	.	.
Alig confidence		.	.	.	.	.																													.																			.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	Y	G	R	F	C	T	G	T	L	D	H	I	S	I	R	Q	L	Q	L	L	L	L	K	V	A	L	L	L	G	V	E	I	H	W	G	V	K	F	T	G	L	Q	P	P	P	R	K	G	S	G	W	R	A	Q	L	Q	P	N	P	P	A	Q	L	A	S	Y	E	F	D	V	L	I	S	A
Template Known Secondary structure		.	.	.	.	.			T	T	T	T		T	T																				T	T						S											S	T	T			B						S								T			B	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	A	N	S	M	V	R	R	H	L	Y	P	D	H	Q	I	R	K	Y	V	A	I	Q	Q	W	F	A	E	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	P	F	Y	S	C	I	F	D	N	S	I	T	N	C	Y	S	W	S	I	S	K	D
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	G	K	F	V	P	E	G	F	T	I	R	E	M	R	G	K	L	A	I	G	I	T	A	N	F	V	N	G	R	T	V	E	E	T	Q	V	P	E	I	S	G	Y	N	Q	K	F	F	Q	S	L	L	K	A	T	G	I	D	L	E	N	I	V	Y	Y	K	D	E	T	H	Y	F	V	M	T	A	K	K	Q
Template Known Secondary structure				T	T				T	T									S																			T	S			B					S	S																					S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.									.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	F	I	F	G	G	A	Y	P	M	K	D	G	Q	T	R	F	.	.	.	.	.	.	.	.	T	T	L	K	E	K	M	S	A	F	Q	F	Q	F	G	K	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	E	K	C	T	V	L	F	P	S	R	W	Q	D	F	V
Query Conservation																				.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	L	L	R	L	G	V	L	R	Q	D	L	S	E	T	D	Q	L	L	G	K	A	N	V	V	P	E	A	L	Q	R	F	A	R	A	A	A	D	F	A	T	H	G	K	L	G	K	L	E	F	A	Q	D	A	R	G	R	P	D	V	A	A	F	D	F	T	S	M	M	R	A	E	S	S	A	R	V	Q	E	K
Template Known Secondary structure						T	T	S	B	S	S			S	S					T	S	T	T	T	B																	T	T	T	T	T		S			B		B		T	T	S	S	B								S						S		S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		263	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure						.																																				.	.	.	.	.
Query SS confidence						.																																				.	.	.	.	.
Query Sequence		C	G	K	D	.	N	A	F	L	I	G	E	A	A	G	F	I	S	A	S	S	L	E	G	I	S	Y	A	L	D	S	T	D	I	L	R	S	V	L	L	.	.	.	.	.	K	Q	P	E	K	L	N	T	A	Y	W	R	A	T	R
Query Conservation						.																																				.	.	.	.	.
Alig confidence						.																																				.	.	.	.	.
Template Conservation
Template Sequence		H	G	A	R	L	L	L	G	L	V	G	D	C	L	V	E	P	F	W	P	L	G	T	G	V	A	R	G	F	L	A	A	F	D	A	A	W	M	V	K	R	W	A	E	G	A	G	P	L	E	V	L	A	E	R	E	S	L	Y	Q
Template Known Secondary structure		T	T									G	G	G	T	B				G	G	G																							T	T															T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions