Job Description P31456 Confidence 99.02% Date Thu Jan 5 11:47:48 GMT 2012 Rank 170 Aligned Residues 156 % Identity 15% Template c1xdiA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:rv3303c-lpda; PDBTitle: crystal structure of lpda (rv3303c) from mycobacterium tuberculosis Resolution 2.81 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.																												.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	H	F	D	V	A	I	I	G	L	G	P	A	G	S	A	L	A	R	K	L	A	G	.	.	.	.	K	M	Q	V	I	A	L	D	K	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	C	G	T	E	G	F	S	K	P	C	G	G	L
Query Conservation																										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		V	T	.	.	R	I	V	I	L	G	G	G	P	A	G	Y	E	A	A	L	V	A	A	T	S	H	P	E	T	T	Q	V	T	V	I	D	C	D	G	I	G	G	A	A	V	L	D	D	C	V	P	S	K	T	F	I	A	S	T	G	L	R	T	E	L	R	R	A	P	H	L	G	F	H	K	I	S	L	P	Q
Template Known Secondary structure				.	.								S															T	T	T								S	S		T	T						T	S																		T	T	T	T	T	T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		2	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	P	D	A	Q	R	S	F	I	R	D	G	L	T	L	P	V	D	V	I	A	N	P	Q	I	F	S	V	K	T	V	D	V	A	A	S	L	T	R	N	Y	Q	R	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	A	R	V	K	T	L	A	A	A	Q	S	A	D	I	T	A	Q	L	L	S	M	G	V	Q	V	I	A	G	R	G	E	L	I	D	S	T	P	G	L	A	R	H	R	I	K	A	T	A	A	D	G	S	T	S	E	H	E	A	D	V	V	L	V	A	T	G	A	S	P	R	I	L	P	S	A	Q	P	D
Template Known Secondary structure																								T	T						S							S	S	S			S	S								T	T	S								S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																																																							96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	I	N	R	H	A	F	D	L	W	M	K	S	L	I	P	A	S	V	E	V	Y	H	D	S	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	R	I	L	T	W	R	Q	L	Y	D	L	D	A	L	P	D	H	L	I	V	V	G	S	G	V	T	G	A	E	F	V	D	A	Y	T	E	L	G	V	P	V	T	V	V	A	S	Q	D	H	V	L	P	Y	E	D	A	D	A	A	L	V	L	E	E	S	F	A	E	R	G	V	R	L	F	K	N	A	R
Template Known Secondary structure		S	S	S				G	G	G	G	G	G		S	S			S	S					S		S													T	T								S	S	S	S	S	S			S	S														T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	K	I	W	R	E	D	D	K	W	H	V	I	F	R	A	D	G	W	E	Q	H	I	T	A	R	Y	L	V	G	A	D	G	A	N	S	M	V
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		A	A	S	V	T	R	T	G	A	G	V	L	V	T	M	.	.	.	T	D	G	R	T	V	E	G	S	H	A	L	M	T	I	G	S	V	P	N	T
Template Known Secondary structure									S	S	S						.	.	.	T	T	S						S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions