Job Description P77756 Confidence 99.45% Date Thu Jan 5 12:32:35 GMT 2012 Rank 34 Aligned Residues 166 % Identity 19% Template c3q4gA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: structure of nad synthetase from vibrio cholerae Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.												.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	R	A	V	V	V	F	S	G	G	Q	D	S	T	T	C	L	V	Q	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	Q	Y	D	E	V	H	C	V	T	F	D	Y	G	Q	R	H	R	A	E	I	D	V	A	R	E	L	A	L	K	L	G	A	R	A	H	K	V	L	D	V	T	L	L	N	E	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																							.
Template Sequence		Y	K	S	L	V	L	G	I	S	G	G	V	D	S	T	T	C	G	R	L	A	Q	L	A	V	E	E	L	N	Q	Q	H	N	T	T	E	Y	Q	F	I	A	V	R	L	P	Y	G	E	Q	K	D	E	D	.	E	A	Q	L	A	L	S	F	I	R	P	T	H	S	V	S	V	N	I	K	A	G	V	D	G	L
Template Known Secondary structure											S	S																					T	T		S											S	S	S		S				.												S
Template Predicted Secondary structure																																																							.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	S	L	T	R	D	S	I	P	V	P	D	Y	E	P	E	A	D	G	I	P	N	T	F	V	P	G	R	N	I	L	F	L	T	L	A	A	I	Y	A	Y	Q	V	K	A	E	A	V	I	T	G	V	C	E	T	D	F	S	G	Y	P	D	C	R	D	E	F	V	K	A	L	N	H	A	V	S	L	G
Query Conservation
Alig confidence																								.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	A	S	H	H	A	L	A	N	T	G	L	I	P	S	D	P	A	K	V	D	.	F	I	K	G	N	V	K	A	R	A	R	X	V	A	Q	Y	E	I	A	G	Y	V	G	G	L	V	L	G	T	D	H	S	A	E	N	I	T	G	F	Y	T	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T		S		S	S						.																							T				B											T		S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	D	I	R	F	E	T	P	L	M	W	I	D	K	A	E	T	W	A	L	A	D	Y	Y	G	K	L	D	L	V	R	N
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	D	G	A	C	D	L	A	P	L	F	G	L	N	K	R	Q	V	R	L	L	A	K	T	L	G	A	P	E	Q	L	V	Y
Template Known Secondary structure		.	T	T	T			S	B		T	T	T	T													T	T							T
Template Predicted Secondary structure		.
Template SS confidence
			181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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