Job Description P77756 Confidence 99.33% Date Thu Jan 5 12:32:35 GMT 2012 Rank 38 Aligned Residues 165 % Identity 19% Template c3dpiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		M	K	R	A	V	V	V	F	S	G	G	Q	D	S	T	T	C	L	V	Q	A	L	Q	Q	.	.	.	.	.	.	.	Y	D	E	V	H	C	V	T	F	D	Y	G	Q	R	H	R	A	E	I	D	V	A	R	E	L	A	L	K	L	G	A	R	A	H	K	V	L	D	V	T	L	L	N	E	L	A	V	S	S
Query Conservation																										.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																							.	.									.
Template Conservation																																																							.	.									.
Template Sequence		L	R	A	C	V	L	G	I	S	G	G	I	D	S	S	T	A	G	R	L	A	Q	L	A	V	E	R	L	R	A	S	G	Y	D	A	R	F	V	A	M	R	L	P	Y	G	A	E	A	D	A	R	R	A	.	.	L	A	F	V	R	A	D	E	.	T	L	T	V	D	V	K	P	A	A	D	A	M	L	A	A
Template Known Secondary structure											S	S																				T	T												S										.	.							S		.
Template Predicted Secondary structure																																																							.	.									.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	D	S	I	P	V	P	D	Y	E	P	E	A	D	G	I	P	N	T	F	V	P	G	R	N	I	L	F	L	T	L	A	A	I	Y	A	Y	Q	V	K	A	E	A	V	I	T	G	V	C	E	T	D	F	S	G	Y	P	D	C	R	D	E	F	V	K	A	L	N	H	A	V	S	L	G	M	A	K	D
Query Conservation
Alig confidence																																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	G	G	L	A	Y	L	D	H	A	Q	Q	D	F	V	L	G	N	I	K	A	R	E	R	M	I	A	Q	Y	.	.	.	.	A	V	A	G	A	R	N	G	V	V	I	G	T	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	E	S	V	M	G	F	F	T	K	F	G	D	G
Template Known Secondary structure					T	T																											.	.	.	.						T	T				B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	F	E	T	P	L	M	W	I	D	K	A	E	T	W	A	L	A	D	Y	Y	G	K	L	D	L	V	R	N	E	T	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	D	V	L	P	L	A	G	L	T	K	R	R	V	R	A	L	A	R	M	L	G	A	D	E	P	L	V	L	K	T	P	T
Template Known Secondary structure				S	B		T	T	T	T													T	T							T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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