Job Description P77756 Confidence 99.67% Date Thu Jan 5 12:32:35 GMT 2012 Rank 26 Aligned Residues 150 % Identity 16% Template c3a2kB_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils complexed with trna Resolution 3.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.	.	.	.																		.	.	.
Query SS confidence																								.	.	.	.																		.	.	.
Query Sequence		K	R	A	V	V	V	F	S	G	G	Q	D	S	T	T	C	L	V	Q	A	L	Q	.	.	.	.	Q	Y	D	E	V	H	C	V	T	F	D	Y	G	Q	R	H	R	.	.	.	A	E	I	D	V	A	R	E	L	A	L	K	L	G	A	R	A	H	K	V	L	D	V	T	L	L	N	E	L	A	V	S	S	L
Query Conservation																								.	.	.	.																		.	.	.
Alig confidence																								.	.	.	.																		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	V	I	V	G	V	S	G	G	P	D	S	L	A	L	L	H	V	F	L	S	L	R	D	E	W	K	L	Q	V	I	A	A	H	V	D	H	M	F	R	G	R	E	S	E	E	E	M	E	F	V	K	R	F	C	V	E	R	R	I	L	C	E	T	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	B							S	S																T	T	T		B									T	T		T																	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.
Query Sequence		T	R	D	S	I	P	V	P	D	Y	E	P	E	A	D	G	I	P	N	T	F	V	P	G	R	N	I	L	F	L	T	L	A	A	I	Y	A	Y	Q	V	K	A	E	A	V	I	T	G	V	C	E	T	D	F	S	G	Y	P	D	C	R	D	E	F	V	K	A	L	N	.	.	.	.	.	.	.	.	H	A	V
Query Conservation																																																																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																											.																							.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																											.																							.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	D	V	P	A	F	Q	R	S	A	G	L	G	A	Q	E	A	A	R	I	C	R	Y	R	F	F	.	A	E	L	M	E	K	H	Q	A	G	Y	V	A	V	G	H	H	G	D	D	Q	V	.	.	.	.	.	E	T	I	L	M	R	L	V	R	G	S	T	S	K	G	Y	A	G	I	P
Template Known Secondary structure		.	.	.	.	.	.			T					T	T	T	T			S													.						T	T	T															.	.	.	.	.													S	S	S	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.																											.																							.	.	.	.	.
Template SS confidence
								86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	M	A	K	D	I	R	F	E	T	P	L	M	W	I	D	K	A	E	T	W	A	L	A	D	Y	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	R	P	F	H	G	G	Y	L	I	R	P	F	L	A	V	S	R	A	E	I	E	A	Y	C	R	Q	M	G
Template Known Secondary structure		S					S	S	S					G	G	G	G	S												T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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