Job Description P32669 Confidence 26.12% Date Thu Jan 5 11:49:58 GMT 2012 Rank 206 Aligned Residues 166 % Identity 13% Template d1svda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.80

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																													.									.											.
Query SS confidence																																													.									.											.
Query Sequence		I	W	E	V	L	P	R	L	Q	K	A	I	G	D	E	G	I	L	F	A	Q	T	M	S	R	D	A	Q	G	M	V	E	E	A	K	R	L	R	D	A	I	P	G	.	I	V	V	K	I	P	V	T	.	S	E	G	L	A	A	I	K	I	L	.	K	K	E	G	I	T	T	L	G	T	A	V	Y	S	A	A
Query Conservation																																													.									.											.
Alig confidence																																													.									.											.
Template Conservation
Template Sequence		V	Q	D	A	T	E	T	A	E	A	Q	T	G	E	R	K	G	H	Y	L	N	V	T	A	P	T	P	E	E	M	Y	K	R	A	E	F	A	K	E	I	G	A	P	I	I	M	H	D	Y	I	T	G	G	F	T	A	N	T	G	L	A	K	W	C	Q	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V
Template Known Secondary structure														S	S											S	S															T								T	T	T	T																T								T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		116	.														.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																		.	.	.	.	160	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	A	L	A	G	A	K	Y	V	A	P	.	.	Y	V	N	R	V	D	A	Q	G	G	D	G	I	R	T	V	Q	E	L	Q	T	L	L	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	P	E	S	M	V	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.								.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		I	D	R	N	P	N	H	G	I	H	F	R	V	L	T	K	I	L	R	L	S	G	G	D	H	L	H	T	G	T	V	V	G	K	L	E	G	.	.	.	.	D	R	A	S	T	L	G	W	I	D	L	L	R	E	S	F	I	P	E	D	R	S	R	G	I	F	F	D	Q	D	W	G	S	M	P	G	V	F	A
Template Known Secondary structure				S		T	T	S	S																S							S	T	T	S		G	G	.	.	.	.	G														S					B	G	G	G	T	B		S					T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		164	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure					.	.	.	.																			.																.
Query SS confidence					.	.	.	.																			.																.
Query Sequence		A	A	S	.	.	.	.	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	.	T	L	P	L	D	V	A	Q	Q	M	L	N	T	P	A	.	V	E	S	A	I	E	K	F	E	H	D	W	N	A	A
Query Conservation					.	.	.	.																			.																.
Alig confidence					.	.	.	.											.	.							.								.	.	.	.					.
Template Conservation																			.	.															.	.	.	.
Template Sequence		V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	N	I	.	.	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	.	.	.	.	G	H	P	W	G	N	A	A	G	A	A	A	N	R	V	A	L	E	A	C
Template Known Secondary structure					S	S			G	G	G								.	.			S	S						S					.	.	.	.	T		T	T
Template Predicted Secondary structure																			.	.															.	.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions