Job Description P32669 Confidence 51.50% Date Thu Jan 5 11:49:58 GMT 2012 Rank 151 Aligned Residues 164 % Identity 15% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		I	W	E	V	L	P	R	L	Q	K	A	I	G	D	E	G	I	L	F	A	Q	T	M	S	R	D	A	Q	G	M	V	E	E	A	K	R	L	R	D	A	I	P	G	I	V	V	K	I	P	V	T	S	E	G	L	A	A	I	K	I	L	K	K	.	.	E	G	I	T	T	L	G	T	A	V	Y	S	A	A	Q
Query Conservation																																																																	.	.
Alig confidence																																																.				.													.	.
Template Conservation																																																.				.
Template Sequence		V	M	D	A	V	N	K	A	S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S	V	I	I	M	.	V	D	L	.	I	V	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G
Template Known Secondary structure														T	S											S	S														T	T		S				.			G	.	G	G														T	T	T								T	T	T
Template Predicted Secondary structure																																																.				.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		117	.																.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																		.	.	.	.	160	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	L	A	G	A	K	Y	V	A	.	.	P	Y	V	N	R	V	D	A	Q	G	G	D	G	I	R	T	V	Q	E	L	Q	T	L	L	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	P	E	S	M	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.									.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A	V	G	K	L	E	G	.	.	.	.	D	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	M
Template Known Secondary structure					S		T	T	S	S														T		S							T	T	S	S	T	T		.	.	.	.															S					B	G	G	G	T	B		S					T	T
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		163	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure						.	.	.	.																			.																.
Query SS confidence						.	.	.	.																			.																.
Query Sequence		L	A	A	S	.	.	.	.	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	.	T	L	P	L	D	V	A	Q	Q	M	L	N	T	P	A	.	V	E	S	A	I	E	K	F	E	H	D	W	N	A	A
Query Conservation						.	.	.	.																			.																.
Alig confidence						.	.	.	.											.	.							.								.	.	.	.					.
Template Conservation																				.	.															.	.	.	.
Template Sequence		P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	L	.	.	F	G	D	D	V	V	L	Q	F	G	G	G	T	I	.	.	.	.	G	H	P	Q	G	I	Q	A	G	A	T	A	N	R	V	A	L	E	A	M
Template Known Secondary structure							S			G	G	G								.	.			S	S											.	.	.	.	T		T	T
Template Predicted Secondary structure																				.	.															.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.					410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions