|   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  | . |  |
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|  |  |  |  |  |  |
|
|  |  | . |
Query SS confidence |   |
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| . |
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| . |
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| . |
Query Sequence |   |
I | W | E | V | L | P | R | L | Q | K | A | I | G | D | E | G | I | L | F | A | Q | T | M | S | R | D | A | Q | G | M | V | E | E | A | K | R | L | R | D | A | I | P | G | . |
I | V | V | K | I | P | V | T | S | E | G | L | A | A | I | K | I | L | K | . |
K | E | G | I | T | T | L | G | T | A | V | Y | S | A | A | . |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
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|   |   |   |
|   |
|   |
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|   |   |
|   |   |   |   |   |
| . |
|   |
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|   |
|   |   |
|   |   |
|   |   |   |
|   | . |   |   |
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|   |
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|   |
|   |
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|   |   | . |
Alig confidence |   |
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| . |
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| . |
Template Conservation |   |
  |   |
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|   |
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|   |   |
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|   |   |   |
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|   |
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|   |   |   |   |   |   |
|   |
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|   |   |
|   |
|   |
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|   |   |   |
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|   |   |   |   |
|   |   |
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|   |   |
|   |   |   |   |   |   |   |   |
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|   |
|   |   |
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|   |
Template Sequence |   |
T | M | E | A | V | N | K | A | S | A | A | T | G | E | V | K | G | H | Y | L | N | V | T | A | A | T | M | E | E | M | Y | A | R | A | N | F | A | K | E | L | G | S | V | I | I | M | I | D | L | V | I | G | Y | T | A | I | Q | T | M | A | K | W | A | R | D | N | D | M | I | L | H | L | H | R | A | G | N | S | T | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| B |
|
|  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
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116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
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. | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
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|  |  |  | . | . |  |  |  |
|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
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|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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| . |
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Query Sequence |   |
. |
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. |
Q | G | L | L | A | A | L | A | G | A | K | Y | V | A | . |
. |
P | Y | V | N | R | V | D | A | Q | G | G | D | G | I | R | T | V | Q | E | L | Q | T | L | L | E | . |
. |
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. |
M | H | A | P | E | S | M | V | L | A |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
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|   |
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|   |
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| . | . |
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|   |
|   |
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|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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| . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
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|   |
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|   |
|   |   |   |
|   |   |
|
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
S | R | Q | K | N | H | G | M | N | F | R | V | I | C | K | W | M | R | M | A | G | V | D | H | I | H | A | G | T | V | V | G | K | L | E | G | . |
. |
. |
. |
D | P | I | I | T | R | G | F | Y | K | T | L | L | L | P | K | L | E | R | N | L | Q | E | G | L | F | F | D | M | E | W | A | S | L | R | K | V | M | P | V |
Template Known Secondary structure |   |
 | S |
| T | T | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
|
|
| S | S | S | S | S |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |
|
| B | T | T | T | T | B |
| S |
|  |  |
| T | T |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
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|  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
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| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
Template SS confidence |   |
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  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | |
|
|
|
. | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
  |
  |   |
165 | . | |
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
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| . |
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Query Sequence |   |
A | S | . |
. |
. |
. |
F | K | T | P | R | Q | A | L | D | C | L | L | A | G | C | E | S | I | . |
T | L | P | L | D | V | A | Q | Q | M | L | N | T | P | A | . |
V | E | S | A | I | E | K | F | E | H | D | W | N | A | A |
Query Conservation |   |
|
| . | . | . | . |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |   | . |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   | . |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
| . | . | . | . |
|
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| . | . |
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| . | . | . | . |
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Template Conservation |   |
  |
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|   |   |   |
|   |
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|   |   |   |   |   | . | . |   |
|   |
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|   | . | . | . | . |
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|   |   |
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|   |
|   |
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|   |
Template Sequence |   |
A | S | G | G | I | H | A | G | Q | M | H | Q | L | I | H | Y | . |
. |
L | G | E | D | V | V | L | Q | F | G | G | G | T | I | . |
. |
. |
. |
G | H | P | D | G | I | Q | A | G | A | T | A | N | R | V | A | L | E | A | M |
Template Known Secondary structure |   |
 |  | S | S |
|
| T | T | S |  |  |  |  |  |  |  | . | . |  |
| S | S |
|  |  |  |
| S |  |  |  |  | . | . | . | . | T |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |
|  |  |  |  |  |  |  |
|  |  |  |  | . | . | . | . |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | |
|
. | . | . | . | . | . | 400 | . | . | . | . | . | . | . | |
|
|
|
. | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . |
  |