 |
Job Description | P32669 | Confidence | 95.92% | Date | Thu Jan 5 11:49:58 GMT 2012 |
Rank | 43 | Aligned Residues | 134 |
% Identity | 15% | Template | c3igsB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase 2; |
PDBTitle: structure of the salmonella enterica n-acetylmannosamine-6-phosphate2 2-epimerase
|
Resolution | 1.50 Å |
|
 |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | E | A | K | R | L | R | D | A | I | P | G | I | V | V | K | I | P | V | T | . |
. |
. |
. |
. |
S | E | G | L | A | A | I | K | I | L | K | K | E | G | I | T | T | L | G | T | A | V | Y | S | A | A | Q | G | L | L | A | A | L | A | G | A | K | Y | V | A | P | Y | V | N | R | V | D | A | Q | G | G | D | G | I |
Query Conservation |   |
|   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|   |
| . | . | . | . | . |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   | . |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | D | D | V | D | A | L | A | Q | A | G | A | A | I | I | A | . |
V | D | G | T | A | R | Q | R | P | V | A | V | E | A | L | L | A | R | I | H | H | H | H | L | L | . |
T | X | A | D | C | S | S | V | D | D | G | L | A | C | Q | R | L | G | A | D | I | I | G | T | T | . |
X | S | G | Y | T | T | P | D | T | P | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  | . |  |  |
|
|
| S | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| T | . | T | T | T |
| S | S | S |
|
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
. | . | . | . | . | . | 160 | . | . | . | . |
  |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | V | Q | E | L | Q | T | L | L | E | M | H | A | P | E | S | M | V | L | A | A | S | . |
F | K | T | P | R | Q | A | L | D | C | L | L | A | G | C | E | S | I | T | L | P | L | D | V | A | Q | Q | M | L | N | T | P | A | V | E | S | A | I | E | K | F | E | H | D | W | N | A | A |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
| . |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   | . | . |   |   |
|
|
|
|
|   |
|
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | P | D | L | P | L | V | K | A | L | H | D | . |
. |
A | G | C | R | V | I | A | E | G | R | Y | N | S | P | A | L | A | A | E | A | I | R | Y | G | A | W | A | V | T | V | G | S | A | I | T | R | . |
. |
. |
. |
. |
. |
. |
L | E | H | I | C | G | W | Y | N | D | A | L | K | K | A |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |  |  |  |  |  | . | . | T | T |
|
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|  |  |  |  |
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | |
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|