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Job DescriptionP32669
Confidence68.06%DateThu Jan 5 11:49:58 GMT 2012
Rank126Aligned Residues154
% Identity12%Templatec2p0iA_
PDB info PDB header:lyaseChain: A: PDB Molecule:l-rhamnonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60 .........70.........
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Query Sequence  MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQT. MSRDAQGMVEEAKRLRDAI
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Template Sequence  LDFYCTGPEPTAAKAXGFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVGPDFPIXVDCYXSLNVSYTIELVKAC. LDL
Template Known Secondary structure  SS
T
S




GGG
SSS

TT


T.GGG
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   163......170.........180.........190.........200.........210.........220.........230........ .240.
 
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Query Sequence  PGIVVKIPVTSEGLAAIKILKKEGITTLGT. . . AVYSAAQGLLAALAG. AKYVAPYVNRVDAQGGDGIRTVQELQTLLEM
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Template Sequence  NINWWEECLSPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVXWL. . . . . GGLTELLKVAALAAA
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S
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TTS

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   242.......250.........260.........270.........280.........290.........300. ........310......
 
   156...160
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Query Sequence  HAPES
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Template Sequence  YDVPV
Template Known Secondary structure  TT

B
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   317..320.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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