Return to main results Retrieve Phyre Job Id

Job DescriptionP32669
Confidence24.81%DateThu Jan 5 11:49:58 GMT 2012
Rank215Aligned Residues116
% Identity14%Templatec2o56D_
PDB info PDB header:structural genomics, unknown functionChain: D: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60 .........70.........80.........90.........100.. ...... .110.....
Predicted Secondary structure 





.








.


.

Query SS confidence 





















.









































.





.






Query Sequence  IWEVLPRLQKAIGDEGILFAQT. MSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKE. GITTLG. TAVYSAA
Query Conservation         
       
 




.   
 
 

  
  
     

 



 
  
  
   
   .

 

 .
 


  
Alig confidence 





















.














.

























.





.






Template Conservation 
   
 



  
    
 



       
      
.    
  



    
      
      

  

      
Template Sequence  GYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMI. EELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIYWRW
Template Known Secondary structure 
TTS
TT
S
.GGG

SS
SSS

S

TT

Template Predicted Secondary structure 










.


















Template SS confidence 















































































   199200.........210.........220.........230...... ...240.........250.........260.........270.......
 
   116...120.... .....130.........140.........150.........160
Predicted Secondary structure 

.











Query SS confidence 








.



































Query Sequence  QGLLAALAG. AKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPES
Query Conservation 

  

 

.
 










 
 

   
             
Alig confidence 








.










.....



















Template Conservation       
     
 
  
    .....



     
  
   

  
Template Sequence  GYRPFLENGSLSVIQPDICTC. . . . . GGITEVKKICDMAHVYDKTV
Template Known Secondary structure  TT

S


TTTT.....TTTT
Template Predicted Secondary structure 









.....



Template SS confidence 













































   278.280.........290........ .300.........310........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions