Job Description P32669 Confidence 73.35% Date Thu Jan 5 11:49:58 GMT 2012 Rank 116 Aligned Residues 163 % Identity 17% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.														.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																						.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																						.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	S	I	W	E	V	L	P	R	L	Q	K	A	I	G	D	E	G	I	L	F	A	Q	T	.	.	M	S	R	D	A	Q	G	M	V	E	E	A	K	R	L	R	D	A	I	P	G	.	.	.	I	V	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	V	T	S	E	G	L	A	A	I	K
Query Conservation																											.	.																						.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.										.	.																						.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	.	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q
Template Known Secondary structure		S		S													.	G	G	G		S							T	T	S															T	T			G	G	G					S							T	T	T								T	T	S
Template Predicted Secondary structure																	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	K	K	E	G	I	T	T	L	G	T	A	V	Y	S	A	A	Q	G	L	L	A	A	L	A	G	A	K	Y	V	A	P	Y	V	N	R	V	D	A	Q	G	G	D	G	I	R	T	V	Q	E	L	Q	T	L	L	E	M	H	A	P	E	S	M	V	L	A	A	S	F	K	T	P	R	Q	A	L	D	C	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.													.	.	.	.	.
Template Sequence		I	R	A	R	F	P	H	L	H	I	G	R	S	V	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	.	.	.	.	.	.	R	G	V	S	L	L	S	D	I	K	Q	R	.	.	.	.	.	I	S	I	P	V	I	A	I	G	G	M	T	P	D	R	L	R	D	V	K
Template Known Secondary structure							T	T									S										T	T		S									.	.	.	.	.	.													.	.	.	.	.			S						S	S			G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	L	N	T	P	A	V	E	S	A	I	E	K	F	E	H	D	W	N	A	A
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		Q	A	G	A	D	G	I	A	V	M	S	G	I	F	.	.	.	.	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M
Template Known Secondary structure			T	T		S					S					.	.	.	.	T	S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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