Job Description P37750 Confidence 3.18% Date Thu Jan 5 11:57:27 GMT 2012 Rank 72 Aligned Residues 66 % Identity 20% Template c2zkra_ PDB info PDB header:ribosomal protein/rna Chain: A: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		S	S	A	V	V	I	G	Q	R	V	W	L	G	E	N	V	T	V	L	P	G	.	.	.	.	.	T	I	I	G	N	G	V	V	V	G	A	N	S	V	V	R	G	S	I	P	E	N	T	V	I	A	G	V	P	A	K	I	I	K	K	Y	N	H	E	T	K	L	W	E	K
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		A	E	G	I	H	T	G	Q	F	V	Y	C	G	K	K	A	Q	L	N	I	G	N	V	L	P	V	G	T	M	P	E	G	T	I	V	C	C	L	E	E	K	P	G	D	R	G	K	L	A	R	A	S	G	N	Y	A	T	V	I	S	H	N	P	E	T	K	K	T	R	V	K
Template Known Secondary structure		B	S	S			T	T						S	T	T			S		T	T					G	G	G	S		T	T					S	B		S	S	T	T	S				B	S		S	T	T										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions