Return to main results Retrieve Phyre Job Id

Job DescriptionP77485
Confidence99.94%DateThu Jan 5 12:29:46 GMT 2012
Rank17Aligned Residues133
% Identity23%Templated1ysra1
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine kinase
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   332.......340.........350.........360.........370.........380.........390.........400.........410.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  EKKMLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTPTGETIVVRCQTVDHLVQVI
Query Conservation        
                   
                 
  
  


 

         
 
          
 
Alig confidence 































.





























.















Template Conservation 
  
 

   
               
     .    
  
   
  

 


 


      . 
            
 
Template Sequence  DHVPVDITDLLDRAAHDAARIYPDLDVSLVPS. PTCIIVGLPAGLRLAVDNAIANAVKHGGAT. LVQLSAVSSRAGVEIA
Template Known Secondary structure 

STT

S
.



TT

S.TT
Template Predicted Secondary structure 










.








.




Template SS confidence 















































































   300.........310.........320.........330. ........340.........350.........360. ........370.......
 
   412.......420.........430.........440.........450.........460....... ..470.........480
Predicted Secondary structure 

























.





Query SS confidence 























































.












Query Sequence  VENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTS. DARGTRFVITLPA
Query Conservation 
 
 
 

       




 
          
 



 
   

   

 
 
 
.   

 
 
 


Alig confidence 



















..............





















.












Template Conservation 
 
 
 

        
  
..............



 
   
    

 
 
 
    

   
 


Template Sequence  IDDNGSGVPEGERQVVFERF. . . . . . . . . . . . . . SLGLALVAQQAQLHGGTASLENSPLGGARLVLRLPG
Template Known Secondary structure  SSS


GGGTS
..............



TT

TTSS
Template Predicted Secondary structure 










..............








Template SS confidence 





































































   378.380.........390....... ..400.........410.........420.........430...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions