Job Description P77485 Confidence 98.55% Date Thu Jan 5 12:29:46 GMT 2012 Rank 38 Aligned Residues 89 % Identity 19% Template c3h4lB_ PDB info PDB header:dna binding protein, protein binding Chain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein Resolution 2.50 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.													.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	A	L	S	N	L	L	S	N	A	L	R	Y	T	P	T	G	E	T	I	V	V	R	C	Q	T	V	D	H	L	V	Q	V	I	V	E	N	P	G	T	P	I	A	P	E	H	L	P	R	L	F	D	R	F	Y	R	V	D	P	S	R	Q	R	K	.	.	.	.	.	.	.	.	.	.	.	.	G	E
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.													.																									.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.													.																									.	.	.	.	.	.
Template Sequence		L	T	T	A	V	K	E	L	V	D	N	S	I	D	A	N	A	N	.	.	Q	I	E	I	I	F	K	D	Y	G	L	E	.	S	I	E	C	S	D	N	G	D	G	I	D	P	S	N	Y	E	F	L	A	L	K	H	Y	.	.	.	.	.	.	T	S	K	I	A	K	F	Q	D	V	A	K	V	Q	T	L	G
Template Known Secondary structure																T	T		S	.	.								G	G	G	T	S	.								S					T	T	T	G	G	G	S	S					.	.	.	.	.	.					T	T	S	S						T	T	S	S
Template Predicted Secondary structure																				.	.													.																									.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	S	G	I	G	L	A	I	V	K	S	I	V	V	A	H	K	G	T	V	A	V	T	S	.	D	A	R	G	T	R	F	V	I	T	L
Query Conservation																										.
Alig confidence														.	.	.	.	.								.
Template Conservation														.	.	.	.	.
Template Sequence		F	R	G	E	A	L	S	S	L	C	G	I	.	.	.	.	.	A	K	L	S	V	I	T	T	T	S	P	P	K	A	D	K	L	E	Y
Template Known Secondary structure				S	S								S	.	.	.	.	.	S								S	S	T	T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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