Job Description P77485 Confidence 99.78% Date Thu Jan 5 12:29:46 GMT 2012 Rank 22 Aligned Residues 197 % Identity 17% Template c3gieA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor histidine kinase desk; PDBTitle: crystal structure of deskc_h188e in complex with amp-pcp Resolution 2.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		V	P	I	E	L	E	Q	L	V	L	S	F	N	H	M	I	E	R	I	E	D	.	.	V	F	T	R	Q	S	N	F	S	A	D	I	A	H	E	I	R	T	P	I	T	N	L	I	T	Q	T	E	I	A	L	S	Q	S	R	S	Q	K	E	L	E	D	V	L	Y	S	N	L	E	E	L	T	R	M	A	K	M
Query Conservation																							.	.
Alig confidence																							.	.																																									.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		G	R	K	E	R	E	R	L	E	E	K	L	E	D	A	N	E	R	I	A	E	L	V	K	L	E	E	R	Q	R	I	A	R	D	L	E	D	T	L	G	Q	K	L	S	L	I	G	L	K	S	D	L	A	R	K	L	I	Y	K	D	P	E	Q	.	.	.	.	.	.	A	A	R	E	L	K	S	V	Q	Q	T
Template Known Secondary structure			T	T																																																						T	T	T					.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		V	S	D	M	L	F	L	A	Q	A	D	N	N	Q	L	I	P	E	K	K	M	L	N	L	A	D	E	V	G	K	V	F	D	F	F	E	A	L	A	E	D	R	G	V	E	L	R	F	V	G	D	K	C	Q	V	A	G	D	P	.	.	.	L	M	L	R	R	A	L	S	N	L	L	S	N	A	L	R	Y	T
Query Conservation																																																													.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	T	S	L	N	E	V	R	K	I	V	S	S	M	.	.	.	.	.	.	.	.	.	.	.	R	L	K	D	E	L	I	N	I	K	Q	I	L	E	A	A	D	I	M	F	I	Y	E	E	E	K	W	P	E	N	I	S	L	L	N	E	N	I	L	S	M	C	L	K	E	A	V	T	N	V	V	K	H	S
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.																	T												S	S																							T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.												.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	E	T	I	V	V	R	C	Q	T	V	D	H	L	V	Q	V	I	V	E	N	P	G	T	P	I	A	P	E	H	L	P	R	L	F	D	R	F	Y	R	V	D	P	S	R	Q	R	K	G	E	G	S	G	I	G	L	A	I	V	K	S	I	V	V	A	H	K	G	T	V	A	V	T	S	D	A	R	G
Query Conservation
Alig confidence					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		Q	A	K	.	T	C	R	V	D	I	Q	Q	L	W	K	E	V	V	I	T	V	S	D	D	G	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	L	L	G	M	R	E	R	L	E	F	A	N	G	S	L	H	I	D	T	.	E	N	G
Template Known Secondary structure				S	.										T	T										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T							T	.	T	S	S
Template Predicted Secondary structure					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		299	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.																												.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.
		472	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	F	V	I	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	L	T	M	A	I	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions