Return to main results Retrieve Phyre Job Id

Job DescriptionP77485
Confidence100.00%DateThu Jan 5 12:29:46 GMT 2012
Rank1Aligned Residues217
% Identity25%Templatec3d36B_
PDB info PDB header:transferase/transferase inhibitorChain: B: PDB Molecule:sporulation kinase b; PDBTitle: how to switch off a histidine kinase: crystal structure of2 geobacillus stearothermophilus kinb with the inhibitor sda
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   255....260.........270.........280.........290.........300.........310.........320.........330....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKK
Query Conservation 
                     
                       
  
         
                    
Alig confidence 








































































....


Template Conservation     
      
   








  
      
             
  
     
   

  

        ....   
Template Sequence  PHMVIRAEKHLAASISHEIRNPLTAARGFIQLIEEQPLAADKRRQYARIAIEELDRAEAIITDYLTFAKPAPE. . . . TPE
Template Known Secondary structure  TT








S


SS

SS

....

Template Predicted Secondary structure 








....


Template SS confidence 















































































   192.......200.........210.........220.........230.........240.........250.........260.... ...
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  MLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTPTGETIVVRCQTVDHLVQVIVEN
Query Conservation     
                   
                 
  
  


 

         
 
          
 
 
Alig confidence 















































































Template Conservation     
   
               
          
  
   
  

 


 


        
 
          
 
 
Template Sequence  KLNVKLEIERVIDILRPLANMSCVDIQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGRVLIRIAD
Template Known Secondary structure  TT




T
TT
TT
Template Predicted Secondary structure 





































Template SS confidence 















































































   273......280.........290.........300.........310.........320.........330.........340.........350..
 
   415....420.........430.........440.........450.........460....... ..470.........480
Predicted Secondary structure 

























.





Query SS confidence 




















































.












Query Sequence  PGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTS. DARGTRFVITLPA
Query Conservation   
 

       




 
          
 



 
   

   

 
 
 
.   

 
 
 


Alig confidence 

















.....





























.












Template Conservation   
 

       

    .....      
 



 
        

 
 
      

   
 

 
Template Sequence  TGVGMTKEQLERLGEPYF. . . . . TTKGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPL
Template Known Secondary structure 
S



TTSTT
.....
SSGGG

S
TT
TTT
Template Predicted Secondary structure 











.....
















Template SS confidence 


































































   353......360.........370 .........380.........390.........400.........410....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions