Job Description P77485 Confidence 100.00% Date Thu Jan 5 12:29:46 GMT 2012 Rank 3 Aligned Residues 274 % Identity 16% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	A	V	H	K	G	H	A	P	I	R	S	V	S	R	Q	I	Q	N	I	T	S	K	D	L	D	V	R	L	D	P	Q	T	V	P	I	E	L	E	Q	L	V	L	S	F	N	H	M	I	E	R	I	E	D	V	F	T	R	Q	S	N	F	S	A	D	I	A	H	E	I	R	T	P	I	T	N	L	I
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		F	M	F	L	R	Q	E	L	P	V	R	L	A	N	I	M	K	E	I	S	L	L	P	D	N	L	L	R	T	P	S	V	Q	L	V	Q	.	S	W	Y	I	Q	S	L	Q	E	L	L	D	F	K	D	K	S	A	E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P
Template Known Secondary structure																					T	T	S						T	S								.											G	G	G	T	T	S		T	T																			T	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		282	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		T	Q	T	E	I	A	L	S	.	.	.	.	.	Q	S	R	S	Q	K	E	L	E	D	V	L	Y	S	N	L	E	E	L	T	R	M	A	K	M	V	S	D	M	L	F	L	A	Q	A	D	N	N	Q	L	I	P	E	K	K	M	L	N	L	A	D	E	V	G	K	V	F	D	F	F	E	A	L	A	E	D	R
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																																				.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M	L	L	N	Q	H	S	L	L	F	G	H	.	.	.	.	I	G	S	I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y
Template Known Secondary structure																																																		.	.	.	.	B	T	T	B
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		357											.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390								.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	V	E	L	R	F	V	G	D	K	C	Q	V	A	G	D	P	L	M	L	R	R	A	L	S	N	L	L	S	N	A	L	R	Y	.	.	.	.	.	.	.	T	P	T	G	E	T	I	V	V	R	C	Q	T	V	D	H	L	V	Q	V	I	V	E	N	P	G	T	P	I
Query Conservation			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L	F	K	N	A	M	R	A	T	M	E	H	H	A	N	R	G	V	Y	P	P	I	Q	V	H	V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V
Template Known Secondary structure			S												S	S	S	T	T	S																														S	T	T	T	T													S	S										S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.							.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure															.	.	.	.	.	.																																				.
Query SS confidence															.	.	.	.	.	.																																				.
Query Sequence		A	P	E	H	L	P	R	L	F	D	R	F	Y	.	.	.	.	.	.	R	V	D	P	S	R	Q	R	K	G	E	G	S	G	I	G	L	A	I	V	K	S	I	V	V	A	H	K	G	T	V	A	V	T	S	.	D	A	R	G	T	R	F	V	I	T	L	P	A
Query Conservation															.	.	.	.	.	.																																				.
Alig confidence															.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	Q	Y	F	Q	G	D	L	K	L	Y	S	L	E	G	Y	G	T	D	A	V	I	Y	I	K	A
Template Known Secondary structure							G	G	G	G		T	T	T	T							S	S			S				S	S		T	T													T	T									T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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