Return to main results Retrieve Phyre Job Id

Job DescriptionP77485
Confidence99.94%DateThu Jan 5 12:29:46 GMT 2012
Rank16Aligned Residues146
% Identity26%Templatec2ch4A_
PDB info PDB header:transferase/chemotaxisChain: A: PDB Molecule:chemotaxis protein chea; PDBTitle: complex between bacterial chemotaxis histidine kinase chea2 domains p4 and p5 and receptor-adaptor protein chew
Resolution3.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   333......340.........350.........360.........370.... .....380.........390. ......
Predicted Secondary structure 






















...
............



Query SS confidence 









































. . .
















. . . . . . . . . . . .





Query Sequence  KKMLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPL. . . MLRRALSNLLSNALRYT. . . . . . . . . . . . PTGETI
Query Conservation       
                   
                ... 
  
  


 

    ............     
Alig confidence 









































...
















............





Template Conservation   
  
       
   
   
   

 
 
         
      
   
  

 


    
    
   

   
 
Template Sequence  SHMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTL
Template Known Secondary structure 

TTSTTT


TT
TTTTTS

TT

SS
Template Predicted Secondary structure 
























Template SS confidence 















































































   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   398.400.........410.........420 .........430.........440.........450...
Predicted Secondary structure 







........................
















Query SS confidence 






















. . . . . . . . . . . . . . . . . . . . . . . .
































Query Sequence  VVRCQTVDHLVQVIVENPGTPIA. . . . . . . . . . . . . . . . . . . . . . . . PEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVK
Query Conservation   
          
 
 
 
 

 ........................      




 
          
 



 
  
Alig confidence 






















........................


















.












Template Conservation   
          
 
 
 
 

    
   
                 
    

    
      .   
 



  
 
Template Sequence  ILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVS. EVSGRGVGMDVVK
Template Known Secondary structure 
SS
SS


TT
S
TTGGGS

TTTSTTTT


S.TSS


Template Predicted Secondary structure 


























.






Template SS confidence 















































































   433......440.........450.........460.........470.........480.........490........ .500.........510.
 
   454.....460....... ..470.........
Predicted Secondary structure 


.




Query SS confidence 













.











Query Sequence  SIVVAHKGTVAVTS. DARGTRFVITLP
Query Conservation   

   

 
 
 
.   

 
 
 

Alig confidence 













.











Template Conservation         
 
   
    

      
Template Sequence  NVVESLNGSISIESEKDKGTKVTIRLP
Template Known Secondary structure  TT

TTS
Template Predicted Secondary structure 







Template SS confidence 


























   512.......520.........530........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions