Job Description P77485 Confidence 100.00% Date Thu Jan 5 12:29:46 GMT 2012 Rank 6 Aligned Residues 269 % Identity 18% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	A	V	H	K	G	H	A	P	I	R	S	V	S	R	Q	I	Q	N	I	T	S	K	D	L	D	V	R	L	D	P	Q	T	V	P	I	E	L	E	Q	L	V	L	S	F	N	H	M	I	E	R	I	E	D	V	F	T	R	Q	S	N	F	S	A	D	I	A	H	E	I	R	T	P	I	T	N	L	I
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		Y	M	F	L	R	K	E	L	P	V	R	L	A	N	T	M	R	E	V	N	L	L	P	D	N	L	L	N	R	P	S	V	G	L	V	Q	.	S	W	Y	M	Q	S	F	L	E	L	L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P
Template Known Secondary structure																					T	T	S						T	S								.												G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure																																						.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		282	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																																															.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																																															.	.	.	.	.
Query Sequence		T	Q	T	E	I	A	L	.	.	.	.	.	.	.	S	Q	S	R	S	Q	K	E	L	E	D	V	L	Y	S	N	L	E	E	L	T	R	M	A	K	M	V	S	D	M	L	F	L	A	Q	A	D	N	N	Q	L	I	P	E	K	K	.	.	.	.	.	M	L	N	L	A	D	E	V	G	K	V	F	D	F	F
Query Conservation									.	.	.	.	.	.	.																																															.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation
Template Sequence		T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L	I	N	Q	H	T	L	L	F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A
Template Known Secondary structure																																																		S			S	S		S	S	T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		350	.	.	.	.	.	.	.	.	.											360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.									.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		E	A	L	A	E	D	R	G	V	E	.	.	.	.	.	.	.	.	.	.	L	R	F	V	G	D	K	C	Q	V	A	G	D	P	L	M	L	R	R	A	L	S	N	L	L	S	N	A	L	R	Y	T	.	.	.	.	.	.	.	.	P	T	G	E	T	I	V	V	R	C	Q	T	V	D	H	L	V	Q	V	I
Query Conservation												.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M	L	F	E	L	F	K	N	S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K
Template Known Secondary structure										S												T	T	S	T	T	S																															T	T		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		V	E	N	P	G	T	P	I	A	P	E	H	L	P	R	L	F	D	R	F	Y	R	V	D	P	S	R	Q	R	K	G	E	G	S	G	I	G	L	A	I	V	K	S	I	V	V	A	H	K	G	T	V	A	V	T	S	.	D	A	R	G	T	R	F	V	I	T	L	P	A
Query Conservation																																																										.
Alig confidence																							.	.	.	.	.	.	.	.	.																											.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	.	.	.	.	.	.	.	.	.	S	P	L	F	G	Y	G	L	P	I	S	R	L	Y	A	R	Y	F	Q	G	D	L	K	L	Y	S	M	E	G	V	G	T	D	A	V	I	Y	L	K	A
Template Known Secondary structure						S									G	G	G	G		T	T	T	.	.	.	.	.	.	.	.	.					T	T												T	T									T	T	T										S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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