Job Description P77485 Confidence 98.24% Date Thu Jan 5 12:29:46 GMT 2012 Rank 45 Aligned Residues 92 % Identity 20% Template c1kijB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin Resolution 2.30 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																			.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	A	L	S	N	L	L	S	N	A	L	R	Y	T	P	T	G	E	T	I	V	V	R	C	Q	T	V	D	H	L	V	Q	V	I	V	E	N	P	G	T	P	I	A	P	E	H	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	F	D	R	F	Y	R	V	D	P	S
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation																																			.																																										.	.	.	.	.
Template Sequence		Y	H	H	L	F	K	E	I	L	D	N	A	V	D	E	A	L	A	G	Y	A	T	E	I	L	V	R	L	N	E	D	G	S	.	L	T	V	E	D	N	G	R	G	I	P	V	D	L	M	P	E	E	G	K	P	A	V	E	V	I	Y	N	T	L	H	S	G	G	K	F	E	Q	G	A	Y	.	.	.	.	.
Template Known Secondary structure																			T	T	S										T	T	S		.						S	S						S			T	T	T	T										S	S				S	G	G	G	S	S	S		.	.	.	.	.
Template Predicted Secondary structure																																			.																																										.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	K	G	E	G	S	G	I	G	L	A	I	V	K	S	I	V	V	A	H	K	G	T	V	A	V	T	S	D	A	R	G	T	R	F	V	I	T	L
Query Conservation
Alig confidence		.																				.	.	.	.
Template Conservation		.																				.	.	.	.
Template Sequence		.	K	V	S	G	G	L	H	G	V	G	A	S	V	V	N	A	L	S	E	.	.	.	.	W	T	V	V	E	V	F	R	E	G	K	H	H	R	I	A	F
Template Known Secondary structure		.				S		S	S	T	T	S							T			.	.	.	.									T	T
Template Predicted Secondary structure		.																				.	.	.	.
Template SS confidence
			109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions