Job Description P0ADP0 Confidence 98.30% Date Thu Jan 5 11:21:27 GMT 2012 Rank 87 Aligned Residues 145 % Identity 15% Template c3e8mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:acylneuraminate cytidylyltransferase; PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily Resolution 1.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	R	I	S	A	L	T	F	D	L	D	D	T	L	Y	D	N	R	P	V	I	L	R	T	E	R	E	A	L	T	F	V	Q	N	Y	H	P	A	L	R	S	F	Q	N	E	D	L	Q	R	L	R	Q	A	V	R	E	A	E	P	E	I	Y	H	D	V	T	R	W	R	F	R	S	I	E	Q	A	M	L	D
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	E	I	K	L	I	L	T	D	I	D	G	V	W	T	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S						S	T	T	T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	S	A	E	E	A	S	A	G	A	H	A	A	M	I	N	F	A	K	W	R	S	R	I	D	V	P	Q	Q	T	H	D	T	L	K	Q	L	A	K	K	W	P	L	V	A	I	T	N	G	N	A	Q	P	E	L	F	G	L	G	D	Y	F	E	F	V	L	R	A	G	P	H	G	R	S	K	P	F	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	F	Y	D	Q	T	G	N	E	W	K	K	F	N	T	S	D	S	A	G	I	F	W	A	H	N	K	G	I	P	V	G	I	L	T	G	E	K	T	E	I	V	R	R	R	A	E	K	L	K	V	D	Y	L	F	Q	.	.	.	G	V	V	D	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S								G	G	G										T	T								S													T	T		S					.	.	.	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Template SS confidence
																19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.
Query Sequence		D	M	Y	F	L	A	A	E	K	L	N	V	P	I	G	E	I	L	H	V	G	D	D	L	T	T	D	V	G	G	A	I	R	S	G	M	Q	A	C	W	I	R	P	E	N	G	D	L	M	Q	T	W	D	S	R	L	L	P	H	L	E	I	S	R	.	.	.	.	.	.	L	A	S	L	T	S	L	I
Query Conservation																																																																		.	.	.	.	.	.
Alig confidence																									.													.															.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																									.													.															.	.	.	.	.	.
Template Sequence		S	A	A	E	E	L	C	N	E	L	G	I	N	L	E	Q	V	A	Y	I	G	D	D	.	L	N	D	A	K	L	L	K	R	V	G	I	.	A	G	V	P	A	S	A	P	F	Y	I	R	R	L	.	.	.	.	.	.	S	T	I	F	L	E	K	R	G	G	E	G	V	F	R	E	F	V	E	K	V
Template Known Secondary structure												T			G	G	G							S	.	G	G	G					T	T	S	S		.					T	T	S						T	T	.	.	.	.	.	.		S	S						T	T	T	T
Template Predicted Secondary structure																									.													.															.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions