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Job DescriptionP0ADP0
Confidence97.40%DateThu Jan 5 11:21:27 GMT 2012
Rank109Aligned Residues179
% Identity16%Templatec2iyeC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:copper-transporting atpase; PDBTitle: structure of catalytic cpx-atpase domain copb-b
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  LGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLD
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Template Sequence  IKEIDTIIFDKTGTLTYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPIVTQFIGDSLSLAYAASVEA
Template Known Secondary structure  TT

STTTT........................................S
T
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   407..410.........420.... .....430.........440......
 
   87..90.........100.........110 .........120....
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Query Sequence  AGLSAEEASAGAHAAMINFAKWRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RIDVPQQTHDTLKQ
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Template Sequence  LSSHPIAKAIVKYAKEQGVKILEVKDFKEISGIGVRGKISDKIIEVKKAEDIAVYINGEPIASFNISDVPRPNLKDYLEK
Template Known Secondary structure  T

STT





TTTTT



TT
S

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   447..450.........460.........470.........480.........490.........500.........510.........520......
 
   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  LAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQA
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Template Sequence  LKNEGLKIIILSGDKEDKVKELSKELN. . . . . IQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDG. VNDAAALALAD. . .
Template Known Secondary structure  GGG

SS
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TT


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   530.........540.........550...... ...560.........570.........580......... 590.........600
 
   205....210.........220........ .230........
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Query Sequence  CWIRPENGDLMQTWDSRLLPHLEI. . SRLASLTSLI
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Template Sequence  VSVAMGNGVDISKNV. . . . ADIILVSNDIGTLLGLI
Template Known Secondary structure  STTT
STT

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   601........610..... ....620.........630..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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